Serinus canaria (common canary): 103817498
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Entry
103817498 CDS
T05755
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103817498 (SOX30)
Transcription factors [BR:
scan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103817498 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
103817498
NCBI-ProteinID:
XP_009089916
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MERRVRHCRFRARASPASPPRHREVMGPLGGLRVQVQEHPSRPGHSEGAAKKSRCISAPA
AVEKEARGTIRRERDQERGSGDRQNEEKVLEQTGNKSWRRAAVQTERPSVTYETRPVKVE
KSDAPAGSLCELGNPPQDQNIPVLFQSLPPRSHVQLQGPLSSQLMHVTPVPVKQVPVQLQ
PLLQRPKIETKNVPLTVLPSDSGMPDTPFSKTKSGRVKRPMNAFMVWARIHRAAVAKANP
GANNAEISVQLGLEWSKLTEEQKQPYYEEANKIKLRHREEFPGWVYQPNKKKCSPPPGSA
AFSGTSQSAITTNPAGTLPFSSPTYSFVNSSVKNSIGRPVCESPAIHLPASSIQHAVPMT
LFQTTAASTTSVAVAVPTLPLRPVVSSQHFAEPAQTEAFVSPGLNFSLKRPAPVFAESFS
NRNPSNISSTSGRFSVSNSEIPGISVFPRGIALPQATPFIPSPAYVSAPIGQPAGLFGGT
PQFPFCHPSFIPGPRCFPSSTFPLRAPFGYGNFSSSVPQCFGFYEERNQRQEVIFSTLDE
DYRFRAYSEERLCENQRVCGSPEVVSCQSTCSEERVLSPLPQLDVEVVEEVLPSPPSTPS
STYIVNVTDSDEEEEVKFFQVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtcaggcactgccgcttccgcgcccgggcgagccccgcctcgcccccc
aggcacagggaggtcatgggccccctcggagggctgcgcgtccaagtgcaggagcacccg
agccggcccgggcacagcgaaggagcggcgaagaagagcaggtgcatctcggctccggcg
gcggttgagaaagaggcccggggtactatcaggagagaaagggaccaggaaaggggcagc
ggtgaccgccagaacgaggagaaggtcctggagcaaacgggaaataagtcctggagaaga
gctgccgtccaaacggagcgacccagcgtgacctacgagacccgcccagtgaaggtggag
aagagcgatgccccggctggatcactgtgcgagcttgggaaccctcctcaggatcagaat
atcccggtcttgtttcagtccttacctcccaggtcccacgtacagctccaaggccctctt
tcctcgcagctgatgcatgtgactccagtgccggtaaaacaagtgccggttcaattgcag
cctctactgcagcgaccaaagattgaaacaaaaaacgttcccctcacagtcctgccctcg
gattcagggatgccagacactcccttcagcaagaccaagagtggccgtgtgaagcgtccc
atgaacgcattcatggtgtgggcccggatccacagggctgctgtggccaaagccaaccca
ggggccaacaatgcagagatcagcgtccagctgggcctggagtggagcaaactcactgaa
gagcagaagcagccctattatgaggaagctaacaaaataaaactgaggcacagggaggaa
tttcctggttgggtttatcagccaaacaaaaagaagtgttctccaccacctggctctgct
gcattttcaggcacttcccagagtgccatcactacaaatccagctggcactcttcccttc
tcatcacctacttactcttttgtcaactccagtgttaagaacagtattggacgtccagtc
tgtgagtctcccgccatccatctgccggcctcttccatccagcacgctgtgcccatgacc
cttttccagaccacagctgcaagcaccacatcagtggcagttgcagttccaaccctgccc
ctgcgccctgtagtttcatcacagcactttgctgaacctgctcagacagaagcttttgta
tcacctgggctcaatttctccctgaagagacctgcacccgttttcgctgagagcttcagc
aacaggaacccgagtaacatcagcagcactagtggcaggttttctgtctctaacagtgag
atcccagggatttctgtttttcctagaggcatagctcttccccaggctaccccttttatt
ccctcacctgcctatgtgtctgctcccattggacaaccagctggtttgtttggaggaact
cctcagtttccattttgccacccttcctttatacctggacctcgctgtttcccgtcaagc
acattcccactcagagctccgtttggctacgggaatttctccagctcagtgcctcagtgc
tttggcttttatgaggagaggaaccagaggcaggaggtgatattttccactctggatgaa
gactatcgtttcagggcatactcagaagagaggctctgtgagaaccagcgtgtctgtggg
agccctgaggtcgtgtcctgtcagagcacctgcagcgaggagcgagttctgagccccctg
ccacagctggacgtggaagtggtagaggaggttttgccatcccccccatctactccctcc
agcacttacattgtcaatgtaactgacagtgatgaggaagaggaagtaaagttttttcaa
gtgttgtaa
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