Serinus canaria (common canary): 103817563
Help
Entry
103817563 CDS
T05755
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X8
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103817563 (TNRC6A)
03036 Chromosome and associated proteins [BR:
scan03036
]
103817563 (TNRC6A)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103817563 (TNRC6A)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103817563 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRP4_S1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103817563
NCBI-ProteinID:
XP_018771282
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTSPGTSTPNNAKRA
PASSQQQPLPRYPPREVPPRFRHQEQKQLLKRGQQLPGIAANLGSTPKAFHGQAGGSTGT
NNQPVTNGEVPNSSKKQPDLNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSDKEAW
PSITGSDPELTPECMDTDSASSSGSERNLVIMASGSAAGEGDGIRNGLGHGAQNKFVVGS
NSNNVGNGSINGPWGLSHGSIISTCQVSVDAPDSKSESSNNRMNAWGTISSSSNGGLNPS
TLNSNGNHGAWSVLENSGHALKGSVGSGSPGTSIQCSTIGQMANSQSINSKVGGSAHGSW
GSLQESCDSEVNGTRNVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQMSELPSTA
GPGAWRVSTMNHSQIQASPVANGTSISHLSNGEAKTGGSYGTTWGAYGSSYSGDKCPGPN
SQANGDTVNATLMQPGGSGPGSTNFQINGNKGGGVWEAGAVGSQNVPWGNGSGASAGGSR
RGWGSPAQSAGTNMSNGEWSKLPGSQHSNEGVNGNSRKFTNGWKSTEEEELSSQSSAASQ
MAEQSSTWAKPGTGDSEGSSESAGCHEDRAATEGQNRERRKVDQHTLLQSIVNRTDLDPR
VLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSPNNND
TSSVSGWGDPKSATRWGDSKGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWNDTPKM
KQGWGDGQKASQGWAVSAGDSWGENSRSNHWGEAKKSSSGGSNSDRSVSGWNEPGKSNSV
TWGGNNATPNNSSGWDEPAKSNQSQGWGDPPKSNQPQVWGDSSKPINSPEWNKQDVGSWG
APSATNKPPGSGWLGGPMPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYK
NVNMWNKNVPNSSSSSDQQAQVHPQLLPSSAMSSKESSSGSGWGEPSAPATTVDNGTAAW
GKPMDTGTSWGEPVSDAGGTSGWGNTSLGQQPPNKPGPKSMQDSWCGDDMPLSGSRQTSW
EEEEDVEIGMWNSSSSQEANPSLNWPPYMKKMPTKGMMKGGNKQDETWINPFIKQFTNLS
FSRESPEETIQSNKMDMSGGLLQDKRMEMDKHGLGVGDYNRVVGKGPGSRPQIPKESSMD
RGPYFDKNGNPSVFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLK
YAPNSGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKAQPQRSVPSGGRQQQE
QQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPSMKSFLENVMPHTTPELQKG
PSPINAFSSFPLGMNSNLNVNLDMSSIKEPQSRLRKWTTVDSISMNTSLDQNSSKHGAIS
SGFRLEDSPFVPYDFLNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGY
PNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNY
NVSLSSTAQSTSARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQK
PPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCM
QHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQ
GQSLTPSPGWQSLGSSQSRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSP
NYSTSLWGAPSSSDTRGISSPSPINAFLSVDHLGGGGESM
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggaaaaagagaaaagaagacaagaagaagaaggaagctgctcaaaaaaag
gccattgaacaaaaaatcaaagtgccagaacaaaccaagaccagtgtaagccagccccag
cccgtcacctccaacggcacttccccaggaaccagcactcccaataatgccaagcgggcc
ccagccagcagccagcagcagcccttgcctcggtaccctcctcgggaagtaccgccgcga
ttccgacaccaggaacagaagcagcttctgaaacgggggcagcagttaccagggatagct
gcaaacctgggatccacccccaaggcgttccacggccaggcaggaggcagcactggcacc
aataaccagcccgtgaccaacggagaagtgcccaacagcagcaaaaaacagccagatctg
aaccacagtggtctaggatcccattatgaaaattctcactggggaccagtctcttcaaat
agtgactccagcacaaactgggataaagttatcgtagacggctctgacaaagaagcatgg
ccatcaatcactggcagtgacccagagctgactccagaatgtatggacactgactctgcc
tccagctctgggtcggagcggaacctcgtgatcatggcttcagggagcgcggcaggagag
ggcgacggcattcgcaacggcctcgggcacggggctcagaacaagtttgtggttggtagc
aacagcaataatgtgggcaatggaagtattaatgggccctgggggttgtcccatgggtcc
ataataagcacatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagcaac
aatagaatgaatgcttggggcaccataagctcttcatcaaatggagggttaaatccaagc
actttgaattcaaatggcaaccatggtgcctggtccgtgttggagaacagtggacatgcc
ctgaaagggtccgtggggagtgggagtcctggcacaagcattcagtgcagtaccataggt
cagatggccaacagccagagtattaactcgaaagtgggtggctcggcccacggttcctgg
ggaagccttcaggaaagttgtgattctgaagtaaatggtacaaggaatgtttcattcagt
gggcaacctcaaaaccttaacactgaaatgaatggaccaaataacactactaactttatg
acctctagtttaccaaactctgctggttcggtgcagatgagcgagctgcccagcactgca
gggcccggggcctggcgcgtgagcacaatgaatcattctcagattcaggcctctccggtg
gcaaacggcacttccatctctcacctgagcaacggggaggccaaaaccggcggctcttac
ggtactacctggggtgcctatggctctagttactctggagacaaatgtccaggcccaaac
agccaagctaatggtgacactgtgaatgcaactctaatgcagccgggcggcagcgggccc
ggcagcactaactttcaaatcaacgggaataaaggcggaggggtgtgggaggcaggggcc
gtcggctcccagaacgtgccgtggggaaacgggagcggcgcgagcgccggcgggagcagg
agaggatggggcagccccgcacaaagcgccggcaccaacatgtccaacggggaatggagc
aagctgcccggcagtcagcattccaatgagggcgtcaatggaaacagcaggaagtttaca
aatggatggaagtctactgaggaggaggagctcagcagccagagttctgctgcctcccag
atggctgagcagagcagcacgtgggccaaaccaggtacgggggacagcgaggggagctca
gagagcgccggctgccacgaggacagagcagctaccgagggccagaaccgagagaggagg
aaagttgaccagcacacgttactccaaagcatagtgaacagaactgacctagatccgcgt
gtcctttccaactccgggtggggacagactccaatcaaacagaacactgcctgggacacc
gaaacatcgccgaggggtgaacgaaaaactgacaatgggacagaggcctgggggggctct
gtgacacagacttccagctcaggggggtgtgtggatagacctagccctaataataacgat
acctcatctgtatcggggtggggagatccaaagtctgctactaggtggggagactccaaa
gggtcaaacagccaaggggggtgggaagaagattctgctgctacagtaatggtcaagagc
aatcaatcatggggaagtggcaaagaagaaaagtcgtcctggaatgacacaccgaagatg
aagcagggatggggagatggacagaaggccagccagggttgggcagtgtctgctggtgat
agctggggtgaaaactccagaagtaaccactggggtgaggcaaagaaatccagttctgga
ggcagcaacagcgacaggtcggtgtctggttggaatgagccgggtaaatcaaattctgtt
acttggggaggcaacaatgcgaccccaaacaactcttcaggatgggatgagcctgcaaag
tctaaccagagccagggctggggagaccctccgaaatccaatcagcctcaagtctggggg
gactcgtcaaagccaatcaactctcccgagtggaacaaacaagatgttggctcttgggga
gccccatctgccacgaacaagcccccggggtcgggctggctgggggggccaatgccagcc
ccagccaaggaggaggagcccacgggctgggaggagccatcccccgaatccattcgccgc
aagatggagattgatgatggaacttctgcttggggtgatccgagcaaatacaactacaaa
aatgtgaatatgtggaataaaaatgtccctaacagtagcagcagttcagaccagcaagca
caggtacatccgcagctactgccttcaagtgccatgtctagcaaggagagcagttcgggt
tctggttggggagagccttctgctccagccaccactgtggataacgggacagcggcgtgg
ggcaagcccatggacactgggaccagctggggagagcctgtcagcgatgcaggaggcacc
tcgggctggggaaacacttcccttgggcagcagcctccaaacaagcctgggcctaaatct
atgcaagatagttggtgtggagatgacatgccattgagtggcagtcgtcagaccagctgg
gaggaagaggaggatgtggagattggaatgtggaacagcagttcctcacaagaagcgaac
ccctcgctgaactggccaccctacatgaagaaaatgcccacaaagggaatgatgaaaggt
ggaaataagcaagatgaaacatggatcaatccattcattaagcaattcacaaatctcagt
ttttcaagagaatcaccagaagaaaccatacagagcaataagatggacatgtctggaggg
ttactgcaggacaagaggatggagatggacaagcacggcctgggcgtgggagattacaat
cgtgtggttggaaaaggccccggttctcgtccccaaattcccaaagagtcttccatggat
cgcggtccttacttcgataagaatggcaatcccagtgtgtttggtgttgggaatatagca
gcacagcccaggagcatgcagcagcctccagcacaacctcttaattcatctcagcctaat
ccacgtgctcaagtgcctcctccattactatcccctcaggttccagtatcattactgaag
tatgcaccaaacagcggtggcctgagcccactttttggcccacaacaggtagccatgttg
aatcaactgtcccagttaaaccagctttcccagatctcccagttacagcggctgctggct
cagcagcagaaggcacagccccagaggagtgtgccttcagggggtcggcagcagcaggag
cagcagggtcgatctcttagtatgcagcaacagatgatgcaacagtcccgtcagcttgat
ccaaacctgttaatgaagcagcaaactccaccctctcaacagcagtcactccatcagccc
tccatgaaatccttccttgagaatgtcatgccccacactactcctgagctgcagaaaggg
ccctcaccaatcaatgcattcagcagcttccctctaggaatgaactcaaacttgaatgta
aacttggatatgagcagtattaaagagccacagtctcggctgaggaagtggacgacagtc
gacagcatttctatgaacacatccctagatcagaactccagcaaacatggtgctatttca
agtggttttaggctggaggattctccgtttgttccttacgacttcctgaacagcagtaac
tccccagccagtcctcccggctccattggggacggctggccccgtgccaaatcgcctaat
ggctctagcagtgttaactggcccccagagtttcgccctggtgagccatggaaaggttat
ccaaacatcgaccccgaaactgacccttacgtcactcctggcagtgtcataaacaatctc
tcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctca
tctttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactac
aatgtttccctcagcagtacagcacaaagcacttcagccagaaacagtgattccaaatca
acgtggtctcctggatcagtcactaacacctctctggctcatgagctgtggaaggtccct
ttgccacctaaaagcatcactgctccgtcccggccacctccagggctgacaggccagaaa
ccacccctgtccacttgggataattcccttcgtctgggtggaggatggggaaattctgat
gccagatacacccctggttcgagctggggtgagagcagctcagggagaataacaaattgg
cttgttctgaaaaaccttacacctcagatcgacggctcgaccctgcgtactctgtgcatg
cagcacggcccactaataacattccacctgaacctcccacatggtaatgctttggtccgt
tacagttcaaaagaagaggtagtgaaggcacaaaaatctctgcacatgtgtgttttaggg
aacactactattcttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaa
ggccagtccctgactccgtctcctggctggcagtctctgggatccagccagagccgactc
ggatccatcgatggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggt
gctgggctgtcgggaactagcagtggagaccttcatggcacttcactttgggggagcccc
aactattccacgagcctgtggggtgccccgagcagcagtgacaccaggggaattagcagc
ccatcccccatcaacgctttcctttccgttgaccacctgggtggaggtggagagtccatg
taa
DBGET
integrated database retrieval system
