Serinus canaria (common canary): 103817593
Help
Entry
103817593 CDS
T05755
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan00260
Glycine, serine and threonine metabolism
scan00630
Glyoxylate and dicarboxylate metabolism
scan00670
One carbon pool by folate
scan01100
Metabolic pathways
scan01200
Carbon metabolism
scan01230
Biosynthesis of amino acids
scan01240
Biosynthesis of cofactors
scan04981
Folate transport and metabolism
Module
scan_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103817593 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103817593 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103817593 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103817593 (SHMT1)
Enzymes [BR:
scan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103817593 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
103817593
NCBI-ProteinID:
XP_018771340
UniProt:
A0A8C9MZB6
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MASSAQGLPSTELWASHNKMVMEPLDTNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYRLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAFLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALHQAMTPEFKAYQQQVVANCKALSSALMEMGYDIVTGGSDNHLILV
DLRSKGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRKV
AQYIHKGIELALRVQKDMSPKATLKEFKDKLEDPKYRGELKALKEEVEAFAATFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcagcacagggcctccccagcaccgagctctgggcctcccataacaagatg
gtgatggagccgctggataccaacgaccccgaggtgcacagcatcatcaagaaggagaag
cagaggcagaggttggggctggagttaattgcatcagagaactttgcaagccgagcagtc
ctggaggccctgggatcctgcatgaacaacaaatactctgagggttacccaggacagagg
tactatggcgggacggagtttgtggacgagctggagaggctgtgccagaagagagccctg
caggcttaccggctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cctgcaaactttgcagtgtacacggccctggtggagccccacggcaggatcatggggcta
gacctgcccgatggcggccacctcacccacggcttcatgacagacaagaagaagatctct
gccacctctgtcttctttgagtccatgccctacaaggtcaaccccaagactggttacatc
gactatgacaagctggaggagaatgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgccgatgacaac
ggggcctttctcatggccgacatggcccacatcagcgggctggtggctgccggcgtggtg
ccctcgcccttcgagcactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgcaaaggcacccgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcatcaaccaggcggtgttcccggggctgcag
ggaggcccacacaaccatgccattgcagggattgccgtggcactgcatcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcactctcatcagca
ctgatggagatgggctacgacatcgtcacagggggctctgacaatcacctgatcctggtg
gacctgcgcagcaaaggcacagatggtggccgggccgagcgggtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagcgccctgcggcccagcggcctc
cgcttcggcacacccgctctgacctcgcgcggcttccggcaggacgatttccgcaaggtg
gcccagtacatccacaaagggatcgagctggctctgcgtgtgcagaaggacatgagcccc
aaggccacgctgaaggaattcaaggacaaattggaggacccaaaataccgtggggagctg
aaggcactgaaggaagaggtagaagcctttgcagccacattcccgctcccggggctgcct
gtcctgtaa
DBGET
integrated database retrieval system
