Serinus canaria (common canary): 103817669
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Entry
103817669 CDS
T05755
Symbol
SPAST
Name
(RefSeq) LOW QUALITY PROTEIN: spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103817669 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scan04812
]
103817669 (SPAST)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
103817669 (SPAST)
Membrane trafficking [BR:
scan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103817669 (SPAST)
Cytoskeleton proteins [BR:
scan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103817669 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
MIT
Mg_chelatase
AAA_16
AAA_14
IstB_IS21
AAA_24
AAA_2
NPHP3_N
DUF815
nSTAND3
Motif
Other DBs
NCBI-GeneID:
103817669
NCBI-ProteinID:
XP_030091291
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPTAGASPSSPPGPAPPAAGGAAAAASPHKRNLYYFSYPLF
AAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGEAPEPGGAPETVRACHKRAF
ECISMALRIDEDETGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMTNL
AMAKDRLQLLESGAVPKKKDPLTHTSNSLPRSKTVAKTGSTGLSGHHRTPSYSGVSSSVS
RPAPNPTPSAHKAAPKNSRANKPSTPTTAPRKKKDTKIFRNVDSNLANLILNEVVDSGPA
VKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE
SNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDAS
RRLKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILL
KNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMR
NIKLSDFTESLKKIKRSLSPQTLEAYIRWNKDFGDTTV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggccgagggaagaagaagggctcagccggctccagttccgcgcct
ccgaccgccggcgcctctccctcctcgccgcccgggccggcgccccccgccgccggcggg
gcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctcttc
gccgccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcctggctc
tgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggccggc
gaggcgcccgagcccggcggggcgcccgagacggtgcgggcgtgccacaagcgggccttc
gagtgcatctccatggctctgcgcatcgacgaggacgagacaggacaaaaggaacaagct
gttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtcttagtaatt
ggtcaaggtgatcagtgtgaacgggctcgacgtctccagtctaaaatgatgacaaatttg
gcaatggccaaggatcggttgcagcttttagaaagtggagcagttccaaaaaagaaggac
cccctaacacacacgagtaattcccttcctcgttcaaagactgttgcaaaaactggatcc
acaggcctttcaggtcaccacagaacgcccagctacagtggggtatcatcatctgtgtct
agaccagcacctaatcctacaccttcagctcacaaggccgctcctaaaaatagcagagca
aataagccttctactcctaccaccgctcctcgaaaaaagaaagacactaagatatttaga
aatgtggacagcaatcttgctaatcttatcctaaatgaagttgttgatagtgggccagct
gtcaaatttgatgatatcgcagggcaggaactggctaaacaagctttgcaagaaattgtt
attcttccttctcttagacctgagttatttacaggtctgagagctcctgcgcgtggtcta
ttgctgtttggcccaccaggaaatgggaagacaatgttggccaaagcagttgctgcagaa
tcaaatgctactttctttaacatcagtgcagcgagtctgacttcaaaatatgtgggtgaa
ggggagaaactggtgcgtgctctatttgcagtagccagagaacttcaaccttctataatt
tttattgatgaagttgatagccttttgtgtgaaagacgagaaggtgaacatgatgctagc
aggcgtctaaaaacagaatttttaatagaatttgatggtgtgcagtcttctggagaggac
agaatacttgtaatgggagcaacaaacaggcctcaggagcttgatgatgctgttctcaga
cggttcaccaaacgggtatatgtgtctctaccaaatgaggagacaagattgattttgcta
aaaaatcttctaagcaagcaaggaagtccattaacccaaaaagagttggctcaactcgct
agaatgacagatggatactctggaagcgacctcactgcattagcgaaggatgcggcactt
ggccccattcgagaattaaaaccagaacaggtgaagaacatgtctgccagtgagatgaga
aacatcaaactgtcagatttcacagaatctctgaagaagatcaagcgcagtttgagccct
cagaccctggaggcgtacattcgctggaacaaggactttggagataccacagtgtga
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