Serinus canaria (common canary): 103817830
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Entry
103817830 CDS
T05755
Symbol
CACNA1H
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
scan
Serinus canaria (common canary)
Pathway
scan04010
MAPK signaling pathway
scan04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103817830 (CACNA1H)
04020 Calcium signaling pathway
103817830 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103817830 (CACNA1H)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103817830 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103817830
NCBI-ProteinID:
XP_018771333
LinkDB
All DBs
Position
Unknown
AA seq
2301 aa
AA seq
DB search
PGATWFEHVSMLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMV
ALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSM
RILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTHNLTFLH
PYYRPDEAEENPFICSSHRENGMQRCSNIPSRKESKLECTLSMESYSPSLASPEPSRNSC
INWNQYYNTCMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFI
YFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCY
EELLKYICHIFRKVKRRTIRLYNNWQSKRRKKVNPNSGGGGQSQRSRRRITSIHHLIHHH
HHHHHHHYHISNGSPRGPRSNPELCQLELQVMKPGRQLMLPPPASPRPPGPAGAVHSIYH
ADCHLQGPPGGCRATSSPGGGKLAGLGGQGSMNYPTILPSPGGRGQALPKGRKNGNSAAA
IGSSPGSLGLDSYGKLQQLVGEHGLRRTPSRLSGLSAAGALPSAGGPGLSCELQDCPFCA
SLLDDPEFALSDSDSNGDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKV
VKLWKAFGTKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSM
FALEMLLKLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLV
RFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRK
NFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILV
EGFQAEGDANRSDTDEDKTSANFEDEFEKLKDLRATEMKMYSLAVTPNGHLEGRGAMPPP
IILRTAATPMPTPKCSPHLDSLHALGDSRRGSNASLDPMGYDQKSLSSLRSSPCANWATS
STWGSRRSSWNSLGRAPSLKKKSQSGERESLLSGEGKGSTDDDSDDAKCGSPGRPSPPPR
RAESPDRSQELLPELLRVPSVRQLGPGPAALLPAELRGCNGKMGHGPAELFLRVDGHKEE
ALDYEEDAEDSYCYRIRKALEPYKPQWCKTHENWSLYLFSPQNRLRVTCQKVIAHKMFDH
VVLVFIFLNCITIALERPDIDPLSTERIFLSVSNYIFTAIFVVEMMVKVVALGFFSGENT
YLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKL
VVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHY
RWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRR
PYYADYSPARRSIHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFT
IVFVFEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCS
EENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISP
VYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGTGGSRSGAGE
SRALHGNLEHPKGKHQGLGSAGSLRAQDSQTLLTVRKISVSRMHSLPNDSYMFRPVAPAT
APLPLHEVEMETYPCKAQRGSITSIRSQPVGGSSSLRVPAEAARCPGQDGRHRWKGLGPH
GTPRAPALSKLLCRQEAVRTDSVDGQTPEHKDSQQAEPGEPQPSAKQPQSTLTPSPLHSP
LPATPPRSPPSSPHRPLGPLARKHTCGQHSVPSRPPSPSSPPGPEGCPGEPSDLADEEVR
HINSSAKDWAEEHSDPGSRSTSPFTSPAXAPVPLKNCSTSSLSRREKDLKKFYSTDTKGF
LSKPSWADEQRRHSIEICPSGGAPDRGCQEPTEDKQRPPGHVQPEADYIHGTRRKKKMSP
PCISIDPPMEDDGAAAPRTKPSENTLLRRRTPSCEFPAYRESLELPESRGEHLSIPNFSF
EQLDGGSLSSLSELLDSGQSTPASVDSRPDAEPRKQDHLKTQRGNGKEGGKELLGTAKSP
LRKQDLGPVTAATEEGTDDPV
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
cccggtgccacctggtttgagcacgtgagcatgctggtgatcctgctcaactgcgtcacc
ctgggcatgttccagccctgcgaggacgtggagtgccagtcggagcgctgcaccatcctg
gaggcgttcgatgacttcattttcgccttctttgccgtggaaatggtcatcaagatggtg
gccctgggcatctttgggcagaagtgttaccttggagacacctggaaccgcctggacttc
ttcatcgtcatggcagggatgatggaatattccctggatgggcacaacgtcagcctctcg
gccatccgcaccgtgcgcgtcctgcggcccctgcgcgccatcaacagggtcccgagtatg
aggatcctggtgacgctgctgctggacaccctgcctatgttaggcaacgtcctcctcctc
tgcttcttcgtcttcttcatctttggcattgttggggtccagctctgggcagggctgctc
aggaacaggtgcttcctagacaggaattttgccatgacacacaacctgaccttcctgcac
ccctactaccggccggacgaggcggaggagaaccccttcatctgctcctcgcaccgcgag
aacggcatgcagaggtgctccaacatccccagcaggaaggagtccaagctggagtgcacc
ctcagcatggagtcctacagccccagcctggccagccccgagcccagcaggaactcctgc
atcaactggaaccagtactacaacacctgcatggccggggatgtcaacccccacaacggg
gccatcaattttgataatattggatatgcctggattgctatttttcaggtgataaccctg
gaaggatgggtggacatcatgtattatgtgatggatgcacactctttttacaattttata
tattttatattgcttatcatagttggctccttcttcatgatcaacctgtgcctggtggtg
attgccacgcagttctcggagaccaagcagcgggagaaccagctgatgcaggagcagcgg
gcgcgctacctgtccaacgacagcaccatcgccagcttctcggagccgggcagctgctac
gaggagctgctcaagtacatctgccacatcttcaggaaggtgaagagaaggaccatccgc
ctctacaacaactggcagagcaaacgccgcaaaaaagtcaaccccaacagcggcggcggc
gggcagagccagcggagcaggaggagaatcacctccatccaccacctgatccaccaccac
caccaccaccaccaccaccactaccacatcagcaacgggagcccgcgggggcctcgctcc
aaccccgagctctgccagctggagctgcaggtgatgaagccgggccggcagctgatgttg
ccgccgcccgcctcgcccaggccgccgggccccgccggggccgtgcacagcatctaccac
gccgactgccacctgcagggccctcccgggggctgccgggccaccagcagccctgggggc
ggcaaactggccgggctgggcggccagggcagcatgaactaccccaccatcctgccctcc
cccggcggcaggggccaggccctgcccaaagggaggaagaacgggaattccgctgcggcc
atcgggagcagccccgggagtttgggcctggattcctacgggaagctgcagcagctggtg
ggagagcacggtctccgccggacgcccagccggctgtcggggctgagcgcggccggggct
ctgcccagcgctggtggccccgggctgagctgtgagctgcaggactgtcccttctgtgcc
agcctcctggatgaccccgagttcgccctcagtgactctgacagcaacggcgactccgac
agcaacggcgtctacgagttcacgcaggacctgcgccacggggaccaccgggaccagctc
cagcagcagcggggcaggaggaggaggaagaagaagaaggccaaggagaggaacaaggtg
gtgaagctctggaaggcgttcggcaccaaactcaagaggatcgtggagagcaaatacttc
aaccgtgggatcatgatcgccatcctcatcaacaccctgagcatgggcatcgagtaccac
gagcagccagacgagctgaccaacgccctggagatcagcaacatcgtcttcaccagcatg
tttgccctggagatgctcctcaagctcctggcctttggcatctttggctacatcaagaac
ccctacaacatctttgatgggatcatcgtggtcatcagtgtctgggagatcattgggcag
tcggacgggggcctgtccgtgctcaggacgttccggctgctccgcgtgctgaagctggtg
cgcttcatgcccgccctgcgccgccagctcgtggtgctcatgaagaccatggacaacgtg
gccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatccttggcatgcat
ctttttgggtgcaagttcagcctgaaaaccgacacgggagacacggttccagacaggaag
aattttgattccttgctctgggccatcgtgactgtgttccagatcctcacgcaggaggac
tggaacgtggtgctctacaacgggatggcctccacctcctcctgggctgccctctacttc
gtggccctgatgacctttggcaattatgtgctcttcaacctcctggtggccatcctggtg
gaaggattccaggctgagggagatgccaacaggtcagacacagatgaggacaagacatct
gccaacttcgaggacgagtttgagaagctgaaagacctcagagcaacagagatgaagatg
tactcgctggctgtcacccccaacgggcacctggagggcaggggggccatgcccccgccc
atcatcctgcgcacggccgccacccccatgcccaccccaaagtgctccccacacctggac
tccctgcacgccctcggcgactccaggaggggcagcaacgcctcgctggaccccatgggc
tacgaccagaagtccctgtccagcctccgcagctccccctgcgccaactgggccaccagc
agcacctggggcagccgccgctccagctggaacagcctgggccgggcgccgagcctcaag
aagaagagccagtcgggagagcgggaatcgctgctctccggggagggcaagggcagcacg
gacgacgactcggacgacgccaagtgcggctcgcccggccggccctcgccgccgccgcgc
cgcgccgagtccccggatcgctcgcaggagctgctgcccgagctgctgagggtgccctcg
gtgcgccagctcgggcccggccccgccgccctgctgcccgccgagctccgcggctgcaac
ggcaagatgggccacggccccgccgagctcttcctcagggtggacgggcacaaggaggag
gcgctggactacgaggaggacgcggaggacagttattgctaccggatccgcaaagccctg
gagccctacaaaccccagtggtgcaagactcacgagaactggtccctctacttgttctcc
ccacagaacaggctccgagtgacctgccagaaggtcatcgcccacaaaatgtttgaccac
gtggtgctggtcttcatcttcctcaactgcatcaccatagctctggagagaccagacatc
gaccccctgagcacggaaaggatattcctcagtgtctctaattacatcttcactgccatc
ttcgtggttgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacg
tacctgcagagcagctggaacgtcctggatggagtgctggtctttgtgtccatcattgac
atcattgtgtccatggcatcggcaggaggagccaaaatcctgggagtccttcgtgtgctg
aggcttctgcggaccctgagacctctccgagtcatcagcagagccccaggtctgaagctg
gtggtggaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgt
gctttcttcatcatctttgggattttaggggtccagctttttaaaggcaagttctactac
tgtgacggccctgatgtcaaaaacatcaccacaaaggctgactgcaccaacgctcactac
agatgggtccggaggaagtacaacttcgacaacttggggcaggccctgatgtccctgttt
gtcctctcctccaaggacggctgggtgaacatcatgtacgacgggctggatgccgtgggc
attgaccaacagcccatccagaaccacaacccttggatgctgctctacttcatctccttc
ctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggggtggtggtggagaacttc
cacaagtgccggcagcaccaggaggcggaggaggcgcggcgccgggaggagaagcggctg
cggcgcctggagaaaaagcgcaggagtaaggagatgtacctgtctgaagcccagcgcagg
ccctactacgccgactactccccggccaggaggtccatccacagcctgtgcaccagccac
tacctcgacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggag
cactacaaccagcccaagtccctggatgaagccctcaagtactgcaactacgtgttcacc
atcgtctttgtgttcgaggcactgctcaagctggtggcctttggattccggaggttcttt
aaggacaggtggaaccagctggacttggccatagtgctgctgtccatcgtggggatcacc
ctggaggagatcgagatgaacgccgccctccccatcaaccccaccatcatccgcatcatg
agggtgctcaggattgccagagtgctgaaactgctgaaaatggccacgggcatgagagct
ctgctggacacggtggtgcaagccctgccccaggtagggaaccttggcctactttttatg
ctcctgttttttatctatgctgccctgggagtggaattgtttggcaagctggattgcagt
gaggagaacccctgtgagggcctgagccgccacgccaccttcaccaacttcggcatggcc
ttcctcaccctcttcagggtgtccacgggggacaactggaacgggatcatgaaggacacg
ctgcgggagtgcacgcgggaggacaagcactgcctcagctacctgcccgtcatctccccc
gtctacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggca
gtgctgatgaagcacctggaggagagcaacaaggaggccaaggaggacgctgagatggat
gctgagatcgagctggagatgtccagagggaccggcgggagcaggagcggggccggggag
agccgggcgctgcacgggaacctggagcaccccaagggcaagcaccaaggcctgggcagt
gcaggctcgctgagggcccaggactcgcagaccctgctgacagtcaggaagatctccgtg
tccaggatgcattccctgcccaacgacagctacatgttccggcccgtcgccccggccacg
gccccgctgcccctgcacgaggtggagatggaaacctacccctgcaaagcccaaagagga
tccatcacctccatccgctcccagcccgtggggggcagctcctcactcagggtgcccgcg
gaggccgcgcgctgccccggccaggacgggcggcaccgctggaaggggctgggtccccac
ggcaccccccgggctcctgctctcagcaagctgctctgcagacaggaggccgttcggaca
gactcggtagatggacagactccagagcacaaagacagccagcaagcagagcctggagag
ccccagccatcagcaaagcagccccagagcaccctcacccccagccctctccattccccc
ctcccggccacccctccacgctcgcccccatcctccccacaccggcccctgggccccctg
gcacggaagcacacatgtggccagcacagcgttcccagccggccacccagccccagcagc
ccccctggccccgagggctgcccaggcgagccctcagacctggctgacgaggaggttcgg
cacatcaacagctcagccaaagactgggcggaggagcactcggaccccggcagccgctcc
acctcgcccttcacctccccggccnncgcccccgtgcccctcaagaactgcagcacaagc
agcctctcccgcagggagaaggacttgaagaagttctacagcaccgacaccaagggcttc
ctcagcaagcccagctgggccgacgagcagcggcggcattccatcgagatctgcccctcc
ggcggcgcccccgaccgcggctgccaggagcccaccgaggacaagcagcggccccccggc
cacgtccagccggaggccgactacatccacggaacccggaggaagaagaagatgagcccg
ccctgcatttctatagatcctcccatggaggacgacggagcagcggccccacgcaccaaa
ccctccgagaacaccctgctgcggaggagaaccccgtcctgcgagttcccggcctaccga
gaatccctggagctcccggagagccgaggggagcacctcagcatccccaacttctccttc
gagcagctggacggcggctccttgagcagcctctcggagctgctggacagcgggcagtcc
acgccggcctccgtggactcgcggccggatgctgagccgagaaaacaggatcacttaaaa
actcagcggggcaacggcaaagaggggggcaaagagctgctgggcactgccaagagcccc
ctgcgcaagcaggacttgggccccgtgactgctgccacagaagaaggcacggatgaccca
gtatag
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integrated database retrieval system
