KEGG   Serinus canaria (common canary): 103817904
Entry
103817904         CDS       T05755                                 
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
scan  Serinus canaria (common canary)
Pathway
scan03420  Nucleotide excision repair
scan03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103817904 (ERCC4)
   03460 Fanconi anemia pathway
    103817904 (ERCC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scan03032]
    103817904 (ERCC4)
   03400 DNA repair and recombination proteins [BR:scan03400]
    103817904 (ERCC4)
DNA replication proteins [BR:scan03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103817904 (ERCC4)
DNA repair and recombination proteins [BR:scan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103817904 (ERCC4)
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 103817904
NCBI-ProteinID: XP_030085670
LinkDB
Position
Unknown
AA seq 905 aa
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEKRDVKKENEL
KRELVLESNPKWEALREVLKEIENENNNSDNLGGPGQVLICASDDRACAQLREYIIAGAE
AFLTRLYNKTFGKDEKAGELWIKDRKAVKSKGNAKPDTGPQAKKAKLTASSKQNKQKKQQ
DRTLIQMIGKTEEEKREEIEVEDNKELSGSQEGNTQESIPEDFDFSLPSDCYYGIFKDPL
TIIHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYG
GSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLVLLRDARPASVSADTRK
AGGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISD
LIGSLNNGRLYAQCVSMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSNDVTSKLTLL
TLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDF
LLKMPGVNAKNCRALMTHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYAEALAK
GKSKR
NT seq 2718 nt   +upstreamnt  +downstreamnt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctggtgctcgtgctcaacaccagcccggccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgcgttaccaatgaa
attgcaaataatactcgatatgagttttacacacaaggaggagtcatctttgcaacaagt
cggatcctcgtggtagatttccttactgacagaattcctgccaatctcattactggcatt
ttggtgtacaaagcacacagaatcatcgagtcctgtcaggaagcgttcatcctgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcatgtggaaagagtgatgaaaaatctttttgttgggaagctttat
ctgtggccaagatttcatatagcagtgcactcatttttagagaagcataaacctgaagtg
gtggaaatacacgtggcaatgacccctgccatgcttgctatccagactgcaatcctggac
attctgaatgcatgtctgaaggagttgaaacgttacaacccagctcttgaagtagaagat
ctatctttagagaatgccattgctaaaccttttgacaagacaatccgccattatttagat
cctctctggcatcagctcggagctaagacaaagtctttggtccaggacttgaagatccta
cgtactctgctactgtatctaacccagtatgattgtgtcacttttcttaatctcctggag
tcactgaaagcaagtgaaaaagcctttggtgagaattcagggtggctgttccttgactcc
agtacttcgatgtttgtgaatgctcgagctcgagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgatgtaaagaaggaaaatgaactg
aaaagggaattggttctagaaagtaatccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataacaacagtgacaaccttggtggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtacattattgctggagcagaa
gctttcttaacaagactatataacaaaaccttcggaaaggacgagaaagctggagagctg
tggattaaggacagaaaagccgtcaagtccaaaggaaatgccaaaccagacacagggcct
caagccaaaaaagccaaactgacagcttcttcaaaacaaaataaacagaagaagcagcag
gaccgaactctaatccaaatgatagggaaaactgaggaggaaaagagagaggagattgag
gtggaagacaacaaagaattaagtggtagccaagaaggcaacactcaagagtccattcct
gaagattttgatttcagcttgccctcagattgttactatgggattttcaaggacccactg
acaattatccacccgctgcagggctgtggggatccctacgcgctcactcgggtgctgcac
gaagtagaacccagatatgttgtgttgtatgatgcagaactcacttttgttcggcagctg
gaaatctacaaggcaagcaggcctgggaagcctttgagagtttatttcctcatatatggg
ggctccacggaagagcagcgctacctcacagctctgaggaaagagaaggaggccttcgaa
aaactcattcgagagaaggccagcatggttgttcctgaagaaagagaaggaagagatgaa
acaaatttagtcctcctcagagatgctagacctgcctctgtctctgctgacacacgcaaa
gcaggtggacaggaacagaaaggtgttcagcaaaccataatcgtggatatgcgggaattc
cgtagtgagcttccatcactgatccatcgccgtgggattgacattgagcccgtgactttg
gaagttggggattatattctaacccctgacatctgtgtggagcggaagagcatcagcgat
ctgattggttccctaaacaatggcaggctgtacgcacagtgtgtgtccatgtgccgctac
tacaagcggccggttctcctcattgaatttgatcctaacaaatccttctccttgatccca
cgaggctctttacagccagaaatttccagcaatgatgttacttctaaactaacccttctc
acactgcacttcccaaagttacgaatcctgtggtgtccctctccccacgctactgctgaa
ctctttgaagagttgaaacaaaaccatcctcaacccgacgcagagacagcgatggccgtc
accgcagattccgaaattctccccgagtcagacaagtacaaccctgggcctcaggacttc
ctgctaaaaatgccaggggttaatgcaaagaactgccgtgccttaatgacccacgttaaa
agcattgcagagctggtgacactgtccaaggatgagctatccaagattttgggtaatgct
gccaatgccacacaactcttcgactttattcacctgacctatgcagaggcactagccaaa
ggaaaaagcaaaagatga

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