Serinus canaria (common canary): 103817904
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Entry
103817904 CDS
T05755
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03420
Nucleotide excision repair
scan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103817904 (ERCC4)
03460 Fanconi anemia pathway
103817904 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scan03032
]
103817904 (ERCC4)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103817904 (ERCC4)
DNA replication proteins [BR:
scan03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103817904 (ERCC4)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
103817904 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
103817904
NCBI-ProteinID:
XP_030085670
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPASLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKRYNPALEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEKRDVKKENEL
KRELVLESNPKWEALREVLKEIENENNNSDNLGGPGQVLICASDDRACAQLREYIIAGAE
AFLTRLYNKTFGKDEKAGELWIKDRKAVKSKGNAKPDTGPQAKKAKLTASSKQNKQKKQQ
DRTLIQMIGKTEEEKREEIEVEDNKELSGSQEGNTQESIPEDFDFSLPSDCYYGIFKDPL
TIIHPLQGCGDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYG
GSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLVLLRDARPASVSADTRK
AGGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISD
LIGSLNNGRLYAQCVSMCRYYKRPVLLIEFDPNKSFSLIPRGSLQPEISSNDVTSKLTLL
TLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPGPQDF
LLKMPGVNAKNCRALMTHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYAEALAK
GKSKR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctggtgctcgtgctcaacaccagcccggccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgcgttaccaatgaa
attgcaaataatactcgatatgagttttacacacaaggaggagtcatctttgcaacaagt
cggatcctcgtggtagatttccttactgacagaattcctgccaatctcattactggcatt
ttggtgtacaaagcacacagaatcatcgagtcctgtcaggaagcgttcatcctgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttttgtcatgtggaaagagtgatgaaaaatctttttgttgggaagctttat
ctgtggccaagatttcatatagcagtgcactcatttttagagaagcataaacctgaagtg
gtggaaatacacgtggcaatgacccctgccatgcttgctatccagactgcaatcctggac
attctgaatgcatgtctgaaggagttgaaacgttacaacccagctcttgaagtagaagat
ctatctttagagaatgccattgctaaaccttttgacaagacaatccgccattatttagat
cctctctggcatcagctcggagctaagacaaagtctttggtccaggacttgaagatccta
cgtactctgctactgtatctaacccagtatgattgtgtcacttttcttaatctcctggag
tcactgaaagcaagtgaaaaagcctttggtgagaattcagggtggctgttccttgactcc
agtacttcgatgtttgtgaatgctcgagctcgagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgatgtaaagaaggaaaatgaactg
aaaagggaattggttctagaaagtaatccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataacaacagtgacaaccttggtggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtacattattgctggagcagaa
gctttcttaacaagactatataacaaaaccttcggaaaggacgagaaagctggagagctg
tggattaaggacagaaaagccgtcaagtccaaaggaaatgccaaaccagacacagggcct
caagccaaaaaagccaaactgacagcttcttcaaaacaaaataaacagaagaagcagcag
gaccgaactctaatccaaatgatagggaaaactgaggaggaaaagagagaggagattgag
gtggaagacaacaaagaattaagtggtagccaagaaggcaacactcaagagtccattcct
gaagattttgatttcagcttgccctcagattgttactatgggattttcaaggacccactg
acaattatccacccgctgcagggctgtggggatccctacgcgctcactcgggtgctgcac
gaagtagaacccagatatgttgtgttgtatgatgcagaactcacttttgttcggcagctg
gaaatctacaaggcaagcaggcctgggaagcctttgagagtttatttcctcatatatggg
ggctccacggaagagcagcgctacctcacagctctgaggaaagagaaggaggccttcgaa
aaactcattcgagagaaggccagcatggttgttcctgaagaaagagaaggaagagatgaa
acaaatttagtcctcctcagagatgctagacctgcctctgtctctgctgacacacgcaaa
gcaggtggacaggaacagaaaggtgttcagcaaaccataatcgtggatatgcgggaattc
cgtagtgagcttccatcactgatccatcgccgtgggattgacattgagcccgtgactttg
gaagttggggattatattctaacccctgacatctgtgtggagcggaagagcatcagcgat
ctgattggttccctaaacaatggcaggctgtacgcacagtgtgtgtccatgtgccgctac
tacaagcggccggttctcctcattgaatttgatcctaacaaatccttctccttgatccca
cgaggctctttacagccagaaatttccagcaatgatgttacttctaaactaacccttctc
acactgcacttcccaaagttacgaatcctgtggtgtccctctccccacgctactgctgaa
ctctttgaagagttgaaacaaaaccatcctcaacccgacgcagagacagcgatggccgtc
accgcagattccgaaattctccccgagtcagacaagtacaaccctgggcctcaggacttc
ctgctaaaaatgccaggggttaatgcaaagaactgccgtgccttaatgacccacgttaaa
agcattgcagagctggtgacactgtccaaggatgagctatccaagattttgggtaatgct
gccaatgccacacaactcttcgactttattcacctgacctatgcagaggcactagccaaa
ggaaaaagcaaaagatga
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