Serinus canaria (common canary): 103817909
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Entry
103817909 CDS
T05755
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103817909 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scan01001
]
103817909 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
scan04054
]
103817909 (CIITA)
Enzymes [BR:
scan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103817909 (CIITA)
Protein kinases [BR:
scan01001
]
Serine/threonine kinases: Other
TAF1 family
103817909 (CIITA)
Pattern recognition receptors [BR:
scan04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103817909 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
103817909
NCBI-ProteinID:
XP_018771571
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MPLNNHPVSCTSLTNQHMSCSVPAAHGLERSLIIPGLSEPLTSECLPVSVKGYQANPGLA
GPPKQIFNFVLENGTSDVVVYPVLESSMETFMSPDFPVNLCDLEKFQEVQDSIIPSEEPF
KRPEQVETFCSSLKHYFRDTCKSVTMEREVNLDHLFIDGTLVQSQTETKTGKNSAKTMEK
ELITFSLQEKEKTAIDRSQIFQIPQRKNLETKVIVVLGKAGMGKSILVQKICQDWSNGEF
SQFEFVFWFDCKQISLPEKQYSLKELLLEFFVKPQEGSKEIFEYMLQNPDKVLLIFDGFK
GLHDHENFPRCSASQPEKDLCSIKELLSGLIQKKILNGCTLLFTARPKDKLYQYLSKVDK
TIEIVGFSTQQRELYITKYFEESLYCDCALKLIKECEYLFSHCYSPVMCRFVCFLCETVL
EMGEKSLPSTLTGLFLKFFQQKIMFMQTDVTTPQNQENLATLARVAWCLGEKHQSAMKSD
LIPSKQVKEFALNYGFFLPFAFPRNSDSEEEEFGCTFSDFVIQNFLCALHLLLAEELKDK
NITKYLSFLSKKKKPYNWLDLMPRFLAGLMFLQDDPYFCSLSNEDEKQSTKKQKTLLKYI
RRLQINTLCPERLLELLCCVYETQNNYLLQHVALRLEPELSFLGMVLTPPDIHVLHSILK
RSRKEFSLDLRSSSIDVQGLQALVSLRNVTSFRASLSDTVRLWKSLEQKKDYKLLKASTE
KFVLDPFKAKTMKDISDLSDLVETQEKMINCVQEASGCTSYAIPAIRNLRKLELALGPAC
GLQGLLKLVKILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPSLTSLETLNLSQNKIT
DLGAESLAAALPSLSSLKTLSLYNNNICDFGAENLAKVLPAMTSLRVLDVQYNKITGVGA
QQLTDSLRKCPHMKNLVMWNPTIPYGVLEHLHQLDSRISV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcaacaaccacccagtgagctgcacctccctaactaaccagcacatgtcctgt
tctgttcctgctgcccatgggctggaaagaagcctcatcattcctggattgtcagaacct
ttgacctcagagtgcctaccagtcagtgtaaaagggtatcaagcgaatccaggcttggca
ggtcctcctaagcagatatttaactttgttcttgaaaatggcacatctgatgtggtagtt
tatccagtgctggaatcttccatggaaacattcatgtctccagattttccagttaattta
tgtgatttagagaaatttcaagaagttcaagattccataatcccctctgaagaacctttc
aaaagacctgagcaagtggaaactttctgttcatcccttaagcattatttccgagacacg
tgcaaatctgtgaccatggagcgggaagtaaatctggatcacctgttcattgatgggaca
cttgttcaaagtcaaactgaaaccaagactggaaagaacagtgcaaaaacaatggaaaag
gagctaataaccttcagcctgcaagagaaggaaaagacagccattgatagaagccaaata
tttcaaatcccacagcgtaaaaacttagagactaaagtgattgtggtgctgggaaaagca
ggaatgggcaaaagcattctcgttcagaagatctgccaggactggtccaatggagagttt
tctcagtttgaatttgtattttggtttgactgcaaacaaataagcttgcctgagaagcaa
tacagcctaaaggaactgctgcttgaattttttgtaaaacctcaagagggaagcaaagag
atctttgagtatatgttgcaaaatcctgataaagtccttctgattttcgatggttttaaa
gggctgcatgatcatgagaattttcctcgttgctcagccagccagcctgaaaaggatttg
tgcagtataaaggagctgctttcaggactcatccagaaaaagatactcaatggctgtact
ttattatttacagcaaggccaaaagacaaactgtaccagtacctgtccaaagtggataag
actattgaaattgtgggattttccactcagcagagagaattatacataaccaaatacttt
gaagaatcactctactgtgattgtgcactgaaattaatcaaagagtgtgagtacttgttc
agtcattgttacagtcctgttatgtgtagatttgtttgttttctctgtgagacagtgctt
gaaatgggagagaaaagtcttccttcaactcttactggactcttcctgaaattttttcag
cagaagataatgtttatgcaaacagatgttacaaccccacaaaatcaagagaatcttgct
accctagctcgtgtagcctggtgtcttggagaaaagcaccaaagtgccatgaaaagtgat
cttattccttctaagcaagttaaagagtttgctctgaattatgggtttttcctgccattt
gcattccccagaaattcagatagtgaagaagaggaatttggctgcacattctctgatttt
gtcattcagaatttcttgtgtgcgcttcaccttttgttagcagaagagctcaaggataaa
aatataacgaagtacctgtcttttctatccaagaagaaaaaaccttataactggttagat
ttaatgcctcggtttttggctggtttgatgtttctccaggatgacccctacttctgctct
ctttcaaatgaggatgaaaaacaatcaaccaagaagcagaagacactcttgaaatacatt
agaaggctgcagattaatactctctgtccagagagattgctggagcttttatgttgtgtt
tatgaaacacagaacaattatcttctgcagcatgtggccttaagactcgagccagagttg
tcttttctggggatggttcttacaccacctgacatccatgtactgcactctattttgaaa
aggtcaagaaaagagttttccttggatttgcggagcagcagcattgatgtgcaagggctg
caagccttggtcagcctaaggaatgtgacatccttcagggcttccctcagtgacacagtc
aggctctggaaatctttagaacagaaaaaagactacaaactgctgaaagcatccacagag
aaatttgtgcttgatccctttaaggcaaagacaatgaaggacatcagtgacctctctgac
cttgtagagacgcaggagaagatgattaattgtgtgcaagaagcatctggttgcaccagc
tatgcaattcctgccatcagaaacctcagaaaactcgaattggcgctgggtccagcatgt
ggccttcagggattgctaaaactcgtgaaaattcttgcagcatttccatcacttcagcat
ttagaccttgatgctctgagtgaaaatggcataggagatgaaggagcaaagagtctatct
gaagtctttccatccctgacatcactggaaacattaaatttatcacagaataaaataaca
gacctgggtgcagagagcctcgctgcagctctcccttccttgtcctccttaaaaacacta
agcttgtacaataacaacatttgtgattttggagcagaaaatctggcaaaggttcttcct
gcaatgacatctttaagagtgctagatgttcagtataacaaaataactggtgttggagcc
cagcagctgactgacagcctacgaaaatgtccccatatgaagaacctggtgatgtggaat
cccaccattccctatggagttcttgaacaccttcaccagctggactccaggatcagtgtg
tag
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integrated database retrieval system
