Serinus canaria (common canary): 103817994
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Entry
103817994 CDS
T05755
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03082
ATP-dependent chromatin remodeling
scan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103817994 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103817994 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scan01009
]
103817994 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103817994 (SMARCB1)
03036 Chromosome and associated proteins [BR:
scan03036
]
103817994 (SMARCB1)
Protein phosphatases and associated proteins [BR:
scan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103817994 (SMARCB1)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103817994 (SMARCB1)
SWI/SNF complex
103817994 (SMARCB1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103817994 (SMARCB1)
PBAF complex
103817994 (SMARCB1)
SWI/SNF complex
103817994 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
103817994
NCBI-ProteinID:
XP_009090475
UniProt:
A0A8C9MIV6
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEV
EEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRM
GRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPE
MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLV
DQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTV
EIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggggctccctgtacaagaggtacccctcgctctggaggcgcctggccaccgtg
gaagaaaggaagaagattgtggcctcctcacatgaaaatcagcggtctcacagtccccga
agatatcatggctacacaacattagccactagcgtgacgctgctaaaggcctctgaagtg
gaagagatcttggatggaaatgatgagaagtacaaggcagtgtctatcagcacagaacct
cctacctacctcagagaacagaaggcaaagaggaacaaccagtgggtgccaaccctgccc
aacagctctcatcacctggacgctgtgccgtgctcaacaaccatcaacaggaatcgcatg
ggcagggataagaagagaacattccctctgtgctttgatgaccatgacccagcagtgatc
catgagaatgcatcccagccagaggttctggttccaatcaggctcgatatggaaattgat
gggcagaaactccgagatgcatttacgtggaacatgaatgaaaaactgatgaccccagaa
atgttctccgagattctttgtgatgacctggatttgaatcctctgacctttgtccctgct
attgcatctgccatccgacagcagatcgagtcgtacccgactgacagcatcctggaggat
cagtcagaccaacgagttattattaagctgaacatccatgtaggaaacatctccctggta
gaccagtttgagtgggacatgtcagagaaggagaactcaccagagaagtttgccttgaag
ctgtgctcagagcttggcctgggtggggagtttgtcacgactattgcctacagcatccgg
ggacagctgagctggcaccagaagacctatgccttcagcgagaaccctttgcccaccgtg
gagatcgcaattcgcaacacgggggacgctgaccagtggtgccctctcctggaaaccctc
acagacgctgagatggagaagaagatcagagaccaggacagaaacacaaggcgcatgaga
cgtttggccaatactgctccagcctggtaa
DBGET
integrated database retrieval system
