Serinus canaria (common canary): 103818189
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Entry
103818189 CDS
T05755
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scan03009
]
103818189 (DDX55)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103818189 (DDX55)
Ribosome biogenesis [BR:
scan03009
]
Eukaryotic type
Pre-60S particles
Helicases
103818189 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
103818189
NCBI-ProteinID:
XP_009090731
UniProt:
A0A8C9N707
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MEAVTEGGWSSLPVPLSPGVLQALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILFIGG
RNPMEDVERFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRKH
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNHRLKAEAVEDIESEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgactgagggcggctggagctcgctgccggtgccgctgagcccgggcgtg
ctgcaggcgttgcgggagctccgcttccaccaaatgaccccggtgcagtctgcgaccatc
ccgctgttcatgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaacc
ttggcgtttgtgattcccatactggaaattcttctcagacgggaagaaaagttaaagaaa
atgcaggttggagctataatcatcaccccaaccagggagttggccattcagattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttttcattggtggg
aggaaccccatggaagatgttgaaaggttcaaggagcatggggggaacatcatcgtggcc
accccaggccgcctggaggatctgttcaggaggaaagcagatgggctggaccttgccagc
tgtgtgaaggctctggatgtgctggtgttggatgaagcagacagactcctagatatgggc
tttgaagcaagcttgaatgccattctggacttcttgcccaagcagaggaggacaggtctg
ttctcagctacccagacccaggaggtggagaacctggtgagggcagggctgcggaacccc
gtccgcatctcggtcaaggagaagggagtggcagccagcaacacccagaaaaccccaaca
cgcctggagaactactacatgatctgcaaggcagatgagaaatttaaccaattggtgcat
tttcttcgtcagcacaaacaggaaaagcatctggtatttttcagcacgtgtgcctgtgtg
gaatactatgggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccac
gggaaaatgaagcacaagcgaaacaagattttcacggagttccggaagctcccggggggc
attttggtgtgcacagatgtgatggcccgtggcattgacattccagaagtgcactgggtg
ttgcagtacgacccacccagcagtgccagtgccttcgtgcatcgctgcggtcgcacagcg
cggatcggcaacgtgggcagcgctctggtgttcttgcttcccatggaagaatcctacatt
aacttcctctcaatcaaccagaagtgtcccatgcaggaaatgaaaccacagacgaatgtt
ctggatctccttcctaagctgaagtccatggccctggctgacagggcagtgtttgagaaa
gggatgaaagcctttgtgtcttatgtccaggcttacgccaaacacgaatgtaacctgatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaaaatgcctgaactaagaggaaaatgttttccagactttactccagtcactgtcaat
acagactccatatcatttaaggataaaaacagagaaaagcagagacaaaagaaattagaa
gaacaaagaaaagaaagagaagagaatcaagggaaaaagaaatttgtaaagaacaaagca
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaagcat
gaggagggctctgatattgaagatgaggacatggaagagctgctgaatgacacaagactc
ttgaaaagattaaaaaagggaaaaattagcgaagaagagtttgagaagaaactaacaggc
aaccacaggctcaaagcagaagctgttgaggacatagagtctgaaggctga
DBGET
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