Serinus canaria (common canary): 103818503
Help
Entry
103818503 CDS
T05755
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
scan
Serinus canaria (common canary)
Pathway
scan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103818503 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103818503 (TAF5L)
03036 Chromosome and associated proteins [BR:
scan03036
]
103818503 (TAF5L)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103818503 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
103818503 (TAF5L)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103818503 (TAF5L)
STAGA complex
103818503 (TAF5L)
TFTC complex
103818503 (TAF5L)
SAGA complex
103818503 (TAF5L)
SLIK complex
103818503 (TAF5L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
DSE1_N
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
PAC11
Beta-prop_NOL10_N
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
ASA1
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
PD40
Motif
Other DBs
NCBI-GeneID:
103818503
NCBI-ProteinID:
XP_030091724
UniProt:
A0A8C9U662
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGVLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgtcgtgtctgca
gctccctgcctggcggagccacagcaatatgaagtacagtttggacgattacgcaatttt
ctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgaacagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaaatacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctatgctggtgggagctcctcacgcaacgagagc
aacggcctggaacccagcgatgtgccagcttccattctgcagaacgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgt
ttctatgccttctataacacagagcagttgctgaacactgcagagatttcaccaaatagc
aagctgcttgctgctgggttcgataattcatgtgtgaagctgtggagcctgcgctctagg
aagttgaaatctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaggaagaggatgacaacgcaggcacagaaatgaagatcctgagagga
cactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactcttatcttgt
tccgaggacatgtccatcagatactgggacctcggaagctttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggatttggatattagcccctgcagcctgtactttgcc
agcggttcccacgatcgcaccgcacggctctggtcgtttgatcggacgtacccgctgcga
atatacgcgggccatttgtcagacgtggactgcatcaagttccaccccaattccaactac
ttagcgacgggctccacagacaaaaccgtgcgcctgtggagcactcagcagggcaactcg
gtgcggcttttcaccgggcaccggggccccgtgctggcgctcgccttttcccccaacggt
aagtacctggcatcggcaggtgaagaccagcggctgaagctgtgggacttggcatcagga
gttctttacaaagaactgagggggcacacagacaacataaccagccttacttttagccct
gacagtagtttaattgcttcagcgtcgatggacaattcagttcgggtctgggacattcgg
aacacttactgcaacgcccctgcggatgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
