Serinus canaria (common canary): 103818516
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Entry
103818516 CDS
T05755
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scan03016
]
103818516 (TARBP1)
03036 Chromosome and associated proteins [BR:
scan03036
]
103818516 (TARBP1)
Enzymes [BR:
scan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
103818516 (TARBP1)
Transfer RNA biogenesis [BR:
scan03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103818516 (TARBP1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103818516 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
103818516
NCBI-ProteinID:
XP_030091404
LinkDB
All DBs
Position
Unknown
AA seq
1582 aa
AA seq
DB search
MEVVLADTLLSRCGDRAALLRALSAPLSAEQAEALRLLLQRLAAGGPAAAGEAEALRRAA
WEVALERCRPLLRGGEGAAGSGERLRAARAARGALRHCVQLCGAPLAARLARDALAELAA
GGGAGAQEAAVEALVAAAPRLEEPELLSRCAAAALALVREEGEGEAAAALVAGRLLPALG
ANGAALPRVWEGLLGADGAARAGRALLALSALADALLPRGPAAPGLDARLCPRFWRLVQE
GLTERDGLCRKRARYLLKRALDLSGGQRAELRCPPDGGHEPSLFWWSAEKNEQLLQFWET
YILIMETLEGNQIHVIKPVLPKLNSLYELAISGDKGCWLFHPSWHVCIYRRMFESENKTL
TKEGILHFLELYETKRLPNSFVFSEFVIGPLMDALSESSLYSRMPGQSIGACPPLGMRLQ
KFLATYLTLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALASIPACKVLGAEGLQAL
RDVLQCTMITHQILLRGAAQCYLLQTTMHLTDVEKVSFPEVSSFLLSLRPEESLRRDTLL
WTELCSWLQVNDRCFRNSVTSDLGRQETSSLCQYVHSLVGQYLKASAPERENCFMPDWFE
AKLVSTMILLAADVEQMKNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLRADKS
LQLLLKLLQTRWLKCSNAQDDEVLFFIWKSLVTPVESILEFVLRRLTTNELSTVGDLDRC
DLYLALIPEIMNLCLKVNLKKMSSIKNFLSSLINASIRNLQERNSEKEPKVKEQIRKVAG
MASLAAVCEIMDGELEVHLESLPSVDALKKFISFSQFNEVLKKPSYVEEKNSLQEETTSQ
GWGKIVARFVCDQWICLRFVLNSSATLAQGCEETSAMSLSTAERSKEILQSALEALSILP
SDQVSPVFDCMKVLVPKLLGSSEALCIEAFDLAWKIISSLSNTQLIFWANLKAFVQFIFD
TEVLAVAASAKGQAYTKIKEIIFKLIDLSTTKTGVFNVVLSHCCQSWIFPTVDERSALTN
AFLNAGNYSELITEACVFGTVFRKDQRHIQDVHAFIENLGEKCAANVATESTNRDDHFVR
ICAVKFLCLLDGSNILHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIKNRVWQTLL
VLLPKLNQNFLCETLDRVFQAGFSNNQASVKYLIEWIVILTLHKYPQFLDKFWDCFCYDE
EKLKKSICTFLSVLAHFDIILQNTSEKKPALKKALLVVLQWCFSHNFSVRLYALIALKKI
WGMCRMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLE
TIFYILPRLSELAEDEWISLSRFDRFTDIPLPAAFQCHSRTELHGLKPSDWSQQDMGSHL
AEGDSQTEWTDVQKKIIPWKNSTPSLDLEMAFQDRAAKLGKSNSRLIVVASLIDKPTNLG
GLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGY
TIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVH
VSGALLIWEYTRQQVIKQKQQQ
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctgtcccgctgcggggaccgcgccgcgctgctg
cgggcgctcagcgcgccgctctccgccgagcaggcggaggcgctgcgcctgctgctgcag
cgcctggcggcgggcgggccggcggcggcgggcgaggcggaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcggggcggcgagggcgcggcgggg
agcggggagcggctgcgggcggcgcgggcggcgcggggcgcgctgcggcactgcgtgcag
ctctgcggggcgccgctggcggcgcgcctcgcccgcgacgcgctggccgagctggcggcg
ggcggcggggcgggcgcgcaggaggcggccgtggaggcgctggtggcggcggcgccgcgg
ctggaggagccggagctgctgtcacggtgcgcggcggcggcgctggcgctggtgcgggag
gagggcgaaggcgaggcggcggcggcgctggtggccgggcggctgctgccggcgctgggc
gcgaacggtgcggcgctgccgcgcgtctgggaggggctgctgggcgcggacggagcggcg
cgggccgggcgggcgctgctggcgctgagcgccctggcggacgcgctcctgccgcggggt
ccggccgctccggggctggacgcacgactgtgcccgcggttctggcggctggtgcaggag
ggcctgacggagcgggacgggctgtgccgtaagcgggcccgctacctgctgaagcgagcg
ctggacctgagcggcgggcagcgcgctgagctgcgctgccccccggacggcggacacgag
ccgagtctgttttggtggtctgctgagaagaacgagcaactcctacagttttgggaaact
tacattttgataatggaaactttggaaggaaaccagatccatgtcataaagccagtatta
ccaaaactaaacagtttgtatgagcttgccatatcaggggataaaggttgttggctgttt
cacccatcgtggcatgtgtgcatttacagacgaatgtttgagagtgagaataaaacactg
acaaaggaaggaattcttcattttctggagctttatgaaacaaagcgtcttccaaattca
tttgtgttctcagagtttgttattggaccactaatggatgccctctcagaaagttccctc
tacagcaggatgcctggtcaatcaataggagcctgtcctcctttgggaatgaggttacag
aagtttttggctacttatctcactcttcttccagaagaagaaaaaggtagcttcctgtta
aaatttattcagaagatgacaagtaggcactggtgtgctgttcctattttgtttctttct
atggctttggcatctatccctgcatgtaaagtacttggtgctgaaggacttcaggcttta
agagatgtcctccagtgtactatgattacccatcagattttgttgcgtggagctgctcag
tgctatcttcttcaaacaactatgcatttgacagatgtggagaaagtctccttcccagaa
gtttcaagctttcttctgtcccttagaccagaggagtccctaaggagagatactttgtta
tggacagagctttgcagctggttgcaagtgaatgacaggtgcttcaggaactctgtaacc
tctgatttgggacgtcaggagacatcatcattatgtcagtatgtgcacagtcttgtggga
cagtaccttaaggcatctgcacctgaaagagaaaattgctttatgcctgactggtttgaa
gctaagcttgtctcaacaatgattctgttggctgctgacgtggagcagatgaagaataaa
tacagtggaaaaagcaacatagagtggattgaactagaggctttcttgaaccctcttctg
gatgtcttgatgaaacttggcagtaatgcttacataccaacactgagagcagataaaagc
cttcagcttctcttgaagttattgcagacccgttggttaaaatgttccaatgcacaagat
gatgaagtactgttctttatctggaaatctcttgtgacacccgtggagagcattcttgaa
tttgttctccgacggcttactaccaatgagttaagcactgttggtgacttggatcgttgt
gatctgtacttggctttaattccagagataatgaatttgtgcttgaaagtcaacttgaag
aaaatgtcatctatcaagaatttcctttcatccctgataaatgcatctattcgtaatctt
caggagagaaattctgaaaaggagccgaaggttaaggagcaaattagaaaagtagcaggc
atggcttcactggcagctgtatgtgagataatggatggagagctggaagtgcacctggaa
tctctgccttctgtggatgctctgaagaaattcatttccttttctcaattcaatgaagta
ttaaagaagccatcttatgttgaagaaaaaaatagcttacaggaagaaacgacatctcaa
ggatgggggaagattgttgcgcgctttgtttgtgaccagtggatttgcctccgttttgtt
ttaaattcatctgcaaccctggctcaagggtgtgaagaaacttcagcaatgtcactgtcc
acagctgaaaggtcaaaagaaattttacagtctgcattggaagccctgtctattcttcct
tcagaccaagtttcacctgtatttgactgcatgaaagtcctcgttcccaagcttctgggc
tcatcagaggctctctgcatagaagcatttgatttggcttggaaaattatatcctctttg
agcaacacacagctaatattttgggccaatctgaaagcttttgttcagttcatctttgat
actgaggttctagctgttgctgcaagtgcaaaaggtcaagcatataccaaaataaaagag
ataattttcaagctcatagatctgtccactacaaagactggagtcttcaatgtagtcctt
agtcattgttgtcagtcttggatatttcccactgttgatgagagaagtgccttgacaaat
gctttcttaaatgctggaaattatagtgaacttatcactgaggcttgtgtctttggaact
gtatttaggaaagatcaaagacacattcaggatgtgcatgccttcatagaaaatcttgga
gaaaaatgtgcagcaaatgttgctacagaaagtacaaatcgagatgatcactttgttcgc
atttgtgctgttaaatttctgtgcttgttggatggatcaaatatcttgcataagacattt
atggaagacattttcatcaaactacttgataaggatgaactggtgtccaggtctagaaca
cgctattatgcaaactctttgcagcatagaattaaaaacagggtatggcagacactccta
gttcttctcccaaagcttaaccagaattttttgtgtgaaactcttgacagagtttttcag
gctggattcagtaataatcaggcatctgtgaagtacctcatagaatggattgttatcttg
actctacataaatatcctcaattccttgataaattctgggactgcttttgctatgatgaa
gaaaaacttaaaaaaagcatctgcacatttttatcagtgttggcccactttgacatcatt
cttcaaaacacctcagagaagaagccagctttgaagaaagccctcctagttgttctgcag
tggtgcttcagccataatttcagtgttcgactttatgcattaattgcccttaaaaaaatc
tggggtatgtgcagaatgctgcatgtggaagaatttgaagctctgacaccagttattgaa
tctagccttcaacaagtggaaaacatgcacggcacagggaatgccagaaggaactggcag
cgaatccaagatcacttcttctttgcaacatttcatccagttgaggattatagtctagag
acaatattttacattcttccccgcctttcggagctggctgaggatgaatggatctccctc
tctagatttgacagattcactgacattcctttgccagcagcatttcagtgccattcccga
acggagcttcatggtttgaaaccaagtgactggtctcagcaagacatgggttcacatttg
gctgaaggagacagccagacagagtggactgatgttcaaaagaagattataccttggaag
aacagtactcctagtttagacttggaaatggcatttcaggatcgtgctgctaaacttggc
aagtcaaacagcagattgattgtggtggcttcacttattgataaacctaccaatttagga
ggtttatgtcgtacaagtgaaatatttggggcatctgcactagttgttggcagtcttcat
tatatacaagataagcagtttcagcatctgagtgtttctgcagagcagtggctccccctt
gtcgaggtgaaaccatctcagcttgttgattatttacagcagaaaaaaacagaaggctac
actattattggtgtggagcaaacagctaaaagttttgatcttacagaatattgcttccca
gagaaatcactgttattgctgggaaatgaacatgaaggaatcccagccaacctgattcac
cacctggatgtctgtgtggaaattcctcagcagggcattatccggtcactcaatgtccat
gtgagtggagctctgctgatctgggagtacacaagacaacaagtgatcaagcaaaaacag
cagcagtga
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integrated database retrieval system
