KEGG   Serinus canaria (common canary): 103818703
Entry
103818703         CDS       T05755                                 
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
scan  Serinus canaria (common canary)
Pathway
scan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103818703 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scan03041]
    103818703 (PRPF6)
Spliceosome [BR:scan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    103818703 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    103818703 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N TPR_16 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_17 TPR_2 TPR_8 ARM_TT21_2nd FAT TPR_CcmH_CycH TPR_1 T7SS_EccA1_N ARM_TT21_C ARM_TT21_5th TPR_21 MUM1-like_PWWP
Other DBs
NCBI-GeneID: 103818703
NCBI-ProteinID: XP_009091340
UniProt: A0A8C9NHZ7
LinkDB
Position
Unknown
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggctacgtgccaggg
ctgggccgcggagccacgggcttcaccacccgctctgacatcggccctgcccgcgatgcc
aatgaccccgtggatgaccggcacgcgccgccgggcaagagaaccgtgggtgaccagatg
aaaaagaaccagactgcagatgatgatgatgaggatttgaatgacaccaactacgatgag
ttcaatggctacgctggtagcctgttctcaagtggcccctatgaaaaagatgatgaagaa
gcagatgctatttatgcagctttggataagaggatggatgaacgcaggaaggaaaggagg
gaacaacgagaaaaagaggaaatagaaaagtaccgtatggaacgacccaaaattcaacag
cagttctcagacttgaaacggaaattagcagaggtgactgaggaggagtggctgagtatt
cctgaggttggggatgccaggaacaagcggcagaggaatcctcgctatgagaagctgact
cctgtccctgacagcttctttgcaaagcatttgcagtcaggggagaatcacacttcagtg
gatccacgccagacacaatttggtggactgaatactccatatccagggggtttgaatact
ccatacccaggaggaatgacaccaggcttgatgacacctgggacaggtgaattggatatg
aggaagattggccaagccaggaacaccttgatggatatgaggttaagccaggtgtcggac
tctgtgagtggccagactgtagtggacccaaaaggatatttgacagacttgaattccatg
attcccacacacggaggagatatcaatgatatcaaaaaagcccgtttgctcctgaaatct
gtccgagagaccaatcctcatcatccaccagcctggatagcatcagcccgactggaggag
gtcactggcaaactccaggtggctcgaaacctcatcatgaaaggaacagagatgtgccct
aagagtgaagatgtttggttggaagctgctcggcttcagcctggagatacagccaaggca
gttgtggcccaggctgtgcggcacctgccgcagtcggtgcggatctatatcagagcagca
gagctggagactgacatccgtgccaagaaacgtgtccttaggaaagcccttgagcacgtt
ccaaactcagtacgtttgtggaaagcagccgtggagctggaggaacctgaggatgccagg
atcatgctgagccgggctgtggagtgctgtccaaccagtgttgaactgtggctggcgctg
gcaaggctggagacatatgagaacgctcgtaaagtccttaacaaagcccgcgagaatatc
cccacggatcggcacatctggatcactgctgccaaactggaggaagccaatggaaacacc
cagatggtggagaaaatcattgacagagccatcacatctctcagggctaacggggtggaa
atcaacagggagcagtggatacaggatgctgaggaatgtgataaagctggaagtgtggcc
acgtgccaggcgatcatgagagctgtgattgggatcgggatcgaggaagaagatcggaaa
cacacctggatggaagatgcagacagttgtgttgctcataatgccctggagtgtgcccga
gccatttatgcctatgccttgcaagtcttcccgagcaagaagagtgtgtggctgagagca
gcctattttgaaaagaatcatggaaccagagaatccttggaggctcttttgcagagagct
gttgctcactgtcccaaagcagaggtgctgtggctcatgggagccaaatccaagtggctg
gcaggagatgtgccagcagccagaagcatcttggccctggctttccaggccaaccccaac
agcgaggagatctggctggctgccgtgaagctcgagtcggagaacaatgagtatgaaaga
gcgaggaggctgctggcaaaggctcgcagcagtgcccccacagccagggtcttcatgaag
tctgtgaagttggaatgggtgcttgggaacattgctgcagcccaggagctctgtgaggaa
gccctgaagcactatgaggacttccccaaattgtggatgatgaaaggacaaattgaggaa
caaaaagagctggtagagaaagcacgggaggcttataatcaagggttgaagaagtgcccc
cattccatacccctgtggcttttgctgtccaggctggaggagaaagttgggcagctgact
agagcaagagccatcttggaaaagtctcgcctgaagaatccaaagaatccagatctctgg
ttggagtctgtgcgcttggagtaccgagctgggctgaagaacattgcaaatacactaatg
gccaaggcactgcaagagtgccccaattcagggatcctgtggtcagaagcaattttcctt
gaagcgcgaccgcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgac
ccacatgtcctgctggctgtggccaagctgttctggagcgagcggaaaataaccaaggcc
agagagtggttccaccgcacagtgaagatagactctgatctgggggatgcctgggccttc
ttctacaaatttgagctccagcatggcacagaggaacaacaggaagaggtgaggaagcgc
tgtgagaatgccgaacctcgccacggagagctctggtgtgatgtctccaaagacatagag
aattggcagaaaaagattggagagattcttgtgcttgtggcagccaagctgaaaaatacc
ttctag

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