Serinus canaria (common canary): 103818715
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Entry
103818715 CDS
T05755
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
scan
Serinus canaria (common canary)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
FN3_Tor_3rd
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
103818715
NCBI-ProteinID:
XP_009091354
UniProt:
A0A8C9NNF7
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MLIHTWFFLACLPVVSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNISGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELRNASQTR
NNRRNVGTASGKNLTSSAAEHSGVAEATPPPLNTALSHSAKDRAEKKRQKGIQPKSSGEV
TKNQPSVEASGTDTASTTPKSSQDTPANAERESPGKEKPPKDSLRRGSQFQCDTPAMTDI
VLLVDGSWSIGRNNFKLIKEFLSNLISPFSIAEDKIRVGLSQYSSDPRTEWDLSAHSTRE
QLLEAVRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDANLAA
QTLKNLGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVGKLTRVLCTRIK
ERSHKETTGSAVKDTPVNTGPQLSPTDLKISAVTSKSMHLAWSPPLRPPKKYRVVYYPSK
GGTPKEVVLEGAVSSLQLSNLTSHTEYLVSVIPVYDSAAGDGLRGVTSTLPLSSPRSLRV
SELSHNSLRLSWEAAQGATHYLVLCSAAPDGAEDYTTEVKVTQPEVLLEGLSPSTGYSVA
VYAMYGDDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEPAAPAVRAHHLTYVSSR
GGNAGQVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPRALKV
TELSGNSLRLQWEAVAASDVVVYQIKWSTASGEKPQELSLAGNVATAVLPGLQKNTDYKI
SIWAYYKDGARSDTVSVHHRTNSRSPPTNLFIGSETPSSLQVHWTPPDGRVQHYKITYSP
VSDAAAQQTIMAPGKSSSVTLQSLLPDRAYKVTISAIHYTGESESTSTTGRTAPVLSKFP
SIRGFIPPKAEACPTITSIEGSIRGFDMMEVFGLVEKEYSSIKGVAMEPFVFSGSRTFTL
FRDIQLTQRTSDVHQFAIPPEHTIVALLRLLPDTPKEPFALWQVTDEDFQPLLGVNLDPS
KKSLTYFNHDYKADLQEVSFDEQEVKKIFYGSFHKVHVAVSHSKVKLYVDCKKTAEKPLN
TLGSISTAGFIMLGKVTRTRGPRSGSVPFQLQSLQLLCSSVGAEQDRCCDLPALRDEDTC
PTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPAGPSGQQG
SPGSQGITVQGPVGPPGIKGEKGDTGIPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGP
PGPPGPRGFQGATGTRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVSQAC
ERMIQTHVLKFDSFIHEHARKPVPIWEERLKPGEPGPPGPPGPPGNSGERGENGSPGQPG
KDGYPGERGAPGPKGEKGMSGASEEGSQGPRGRTGPPGEVVQGKPGPKGFPGNVGPPGFP
GVRGQPGQPGQPGGCDVSGCFGADRRDFVP
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttggttctttcttgcctgcctgcctgtggtgagccatgtctgggga
cgagtgggccaagggtcgggccggctgaaactcactgtcctttcagaagacaggctccag
atgaagtggaaggagactgaggggaacatcagtggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtggga
gggctgagccccaccaaggaatacaccctgcaggtctacgtgctcaatggctcccaggaa
gccctgtttgccaagaggaaattcgtgatagaggagctcagaaatgcatcccagactaga
aacaaccgcaggaacgtgggaactgcgtcagggaagaatctcacctcctctgcagctgag
cacagtggggtggctgaggccaccccaccacccctgaacactgccctgtcacactcagca
aaggacagagctgaaaagaaaaggcaaaaggggattcagccaaagagctcaggagaagtg
acaaaaaaccagcccagtgtggaggccagtgggacagacacagcatcaacaaccccaaaa
tcatcccaggacactcctgcaaatgccgagagagaatctccaggaaaagaaaaaccccca
aaggattcactgagacgaggctcccagtttcagtgtgacacacctgccatgactgacatc
gtcctgcttgtggatggctcctggagcattgggcgcaacaatttcaagctcattaaggag
ttcctgagcaatttgatttccccgttcagtattgcagaagacaagatcagagtagggctg
tcccagtacagcagtgacccccgcacagagtgggatctgagcgctcactccacgagggaa
cagctgctggaggccgtgaggaatctgcggtacaagggcggcaacacctttacaggtctg
gcactgacccacgtcctggagcagaatctgaaaccagatgctggtgcccggctggaggct
gagaagctggtaatcctcctgactgatgggaagtctcaggatgatgccaacctggctgct
cagaccttgaaaaacctgggcatagagatatttgccattggggtgaagaacgcggacgag
gcggagctgcggcaggtggcctcggagccgctggagctcaccgtctacaacgtgctggac
ttccccctgctcagctccttggtgggcaaactcacacgggtcctgtgcaccaggatcaag
gagaggagccacaaggaaaccacaggcagcgctgtgaaagacacccctgtgaacacaggt
ccccagctcagcccaactgacctgaaaatatctgctgtgacctccaagagcatgcacttg
gcctggagccctcctctgagaccaccaaagaaatacagggttgtgtattatccatccaag
ggtgggacccccaaagaggtggttttagagggagcagtgtcctccctgcagctgtccaac
ctgacctcgcacacggagtacctggtgtcggtgatccccgtctacgacagcgccgcgggg
gacgggctgagaggagtcacctccacactgcctttgtcttcccctcgctccctgcgcgtc
tctgagctaagccacaacagtctgaggctgagctgggaagcagcccagggagccacacac
tacctggtgctctgctctgcagcccctgatggagcagaggactatacaactgaggtgaag
gtgacccagcccgaggtgctgctggaggggctgtcccccagcactgggtactccgtggca
gtgtatgccatgtatggggacgatgccagtgatccagccagcatccaggaaaccaccttg
gccttgagtcctcccaggtacctgagcttctccgagctgagccacgcatccgtgcgggtc
agctgggagcccgcagcgccggccgtgcgcgctcaccacctcacctacgtctctagcaga
gggggcaacgctggacaggtggaagttcctggcactgcaacatccactgtcctgagacct
ctgtcctccctcacacaatacttcatcagtgtcagatccacatacgatgaaggggactcc
tttccaattactggcaatgtcaccaccttgaaggtcccccctcctcgtgccctgaaggtc
accgagctctctgggaacagcctccgcctgcagtgggaagctgtcgctgcctcggacgtg
gttgtctaccagatcaagtggagcacagccagtggggagaagcctcaggagctctccctg
gctggaaatgtggccacagctgtcctgcccggcctgcagaagaacactgactacaaaatc
tccatctgggcctactacaaagatggtgctcgaagtgacactgtgtctgtccaccacagg
accaattccaggagcccacccaccaacctcttcatcggctctgagacccccagcagcctc
caggtgcactggacccctcctgatggccgagttcagcactacaaaatcacctacagccct
gtttctgatgctgctgcccagcaaactatcatggctccaggcaaaagcagcagtgtgacc
ctgcagtccctgctgcctgatcgagcctacaaggtgaccatttctgccatccactacacg
ggagagagcgagagcacctccaccacaggccggacagctccagtgctgtctaaattccct
tccatccgaggattcatcccacctaaagcagaggcctgccccaccatcacctccattgaa
ggttccataagaggatttgatatgatggaagtttttggcttggtagagaaggaatattcc
tccattaagggcgtggccatggagccctttgtcttcagtggctcccgcaccttcacgctg
ttcagggacattcagctcacccagaggaccagtgacgtccaccagtttgccatcccaccc
gagcacaccatcgtggccctgctgcgcctgctgcccgacacgcccaaggagccctttgcc
ctgtggcaggtcacggacgaggacttccagcccctcctgggggttaacctggaccctagt
aagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaagtctccttt
gacgagcaggaagtgaagaagatattctatgggagctttcataaggtgcacgtggccgtg
agccactccaaggtcaagctctatgtggactgtaagaaaacagcagagaagcccctcaac
accctgggcagcatctccactgctggcttcatcatgctgggaaaagtgacgcgcaccaga
gggccccggagcggctccgtgcccttccagctgcagtctctgcagctcttgtgcagcagt
gtgggggcagagcaggacagatgctgtgatctccctgcactgagggatgaggacacctgc
cctaccttggctcctgcctgttcttgcacttcggggcgccccggcttgccaggaccccca
gggccccctggcagccctgggaggagaggacctcagggggagcagggggagccaggacca
aagggtgagccaggcccccctggacaagtgggaccagcaggtcccagtggccagcaaggc
tctccaggctcccagggaatcacagttcagggccctgtggggccaccaggaattaaagga
gagaaaggagacactggaatccctggcatgcagggcattcctggtgtgcagggagctccg
ggcagggatggacttcaaggtgcaaagggggtgaggggactagaaggcacagctgggcct
ccaggacctcctggaccaaggggtttccaaggagccacaggcacccgaggcagcagtggt
gagaagggacctccaggtgatgttgggccaacagggctgccaggtcccaaaggagaaaga
ggagagaaaggggagccacagtctttggccaccatttaccagctcgttagccaggcctgt
gagaggatgattcagactcatgtgttgaaatttgactcattcatacatgaacatgcaagg
aagccagttcccatctgggaggaaaggttaaaaccaggagaaccaggaccaccaggcccc
ccaggcccacctgggaacagtggagaaagaggagaaaatggcagccctggacagccaggc
aaagatgggtatccaggagagagaggtgccccagggccaaaaggagagaaagggatgtct
ggagccagtgaggaagggagccaaggacccagagggagaacaggcccaccaggagaggtt
gtgcaggggaaaccaggtcccaagggtttccctgggaatgttggtcctccaggtttccct
ggtgtcagagggcagcctgggcagcctgggcagcctgggggctgtgatgtctctggatgt
tttggggctgatagaagagattttgtcccctga
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