KEGG   Serinus canaria (common canary): 103818867
Entry
103818867         CDS       T05755                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
scan  Serinus canaria (common canary)
Pathway
scan04510  Focal adhesion
scan04512  ECM-receptor interaction
scan04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:scan00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103818867 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103818867 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103818867 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:scan00535]
    103818867 (COL9A3)
Proteoglycans [BR:scan00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   103818867 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103818867
NCBI-ProteinID: XP_009091512
LinkDB
Position
Unknown
AA seq 678 aa
MAGISALGLLSLCQLLATASAQSLPRIGPQGPPGPPGPPGPSGKDGIDGEPGPPGLPGPP
GPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPSGKGLPG
PPGPPGPSGLPGGQGFRGPSGPFGLPGFPGPPGPPGPPGLPGALPDGGGDLQCPALCPPG
PPGPPGMPGFKGHTGHKGEPGEVGKQGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMG
PAGDRGDIGFRGPPGIPGPPGKAGDQGTKGPQGFRGPKGDTGKPGPKGNPGARGLIGEPG
MPGKDGRDGAPGLDGEKGDAAPMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAG
PSGEPGIPGDVGIPGERGLPGPRGATGPLGLQGPIGARGVRGFQGPKGASGEPGLPGPTG
IRGETGDRGPLGAPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQG
PNGTAGAPGIPGHPGPMGHQGERGVPGITGKPGPPGKEASEQHIRELCGEMINEQIALLA
ANLRKPLAPGMTGRPGPAGPPGPPGSTGSVGHPGPRGPPGYRGPTGELGDPGPRGDPGEK
GDKGPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGTPGTVGAQGTPGI
CDTSACMGAVAASTSKKS
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggctggaatctctgctcttgggctcctctccctgtgtcagctcttggccacagcatca
gctcagtcccttccaagaattggaccacaaggccctcctggaccaccaggaccccctgga
ccatctggcaaggacggcattgatggagagccaggccctcctggtttgccaggcccacca
gggccaaaaggtgcaccagggaagcctggagctgcaggtgaagctggattgcctggtctt
cctggagtggatggtttaacaggaactgatggcccccctggcccaaatgggcctccagga
gaccgtggtgcattaggacctgctgggccacctggaccatctggcaaaggactaccagga
cctccagggcctccaggacccagtgggctcccagggggacaaggatttcggggcccttct
ggaccttttggtctgccaggattcccagggcctcctggaccacctgggcctcctggtctt
ccaggtgcccttcctgatggtggtggggaccttcagtgcccagctctgtgcccaccaggt
cccccaggccccccaggaatgccaggcttcaagggacacactggtcacaaaggagagcct
ggtgaagtaggaaaacaaggagaaaagggtaaccctggccctcctggccctccagggatt
cccggcagtgttggcctgcagggcccaagaggactgagaggcctccctggtccaatgggt
ccagctggcgacagaggtgacattggattcaggggccctcctggaatcccaggacctcca
gggaaagctggagaccaagggaccaaaggacctcaggggttccgggggcccaaaggtgac
actggtaaacctggaccaaaaggaaacccaggggctcgtgggctcataggagaacctgga
atgcctggcaaggacgggcgggatggagctcctggactcgatggtgagaagggtgacgca
gctcccatgggtgctcctggagagaaggggccaaatggacttcctggtctgcctggaaga
gcaggtattaaaggctcaaagggtgaaccaggcagccctggagagatgggagaggcaggt
ccctctggagagccaggcatccctggcgatgttggcatccctggtgagagaggtctgcca
ggacccagaggagcaactggaccactcggcctccaaggtcccataggagcccgtggtgtc
cgaggtttccaggggcccaaaggtgccagcggtgagcctggccttcctggcccgactggg
atccgtggagagacgggagacaggggtcctcttggtgctccaggtcccaaggggaaccag
ggcattgctggagcagatggcctcccaggtgacaaaggagagctgggtccctttggacct
cctggccaaaaaggagagccaggaaaaagaggagaacttggtccaaaaggtgtccaagga
cctaacgggacagctggagcaccagggatcccaggacatccaggacccatgggtcaccag
ggggagaggggtgtccctggcatcacaggaaaacctggaccccctggcaaagaggccagt
gaacaacatatcagagaactctgtggggaaatgataaatgagcaaattgcactgttggct
gctaacctgaggaagcccttggctcctggaatgacgggacggcctggcccagctgggccc
ccaggccctcctgggagcacggggagtgttgggcatcctggtcctcgtgggccccctggc
tacagagggccaacaggagagcttggtgatcctggacccagaggtgaccctggtgaaaag
ggagacaaaggacctgtgggccaaggcatcgatgggcctgatggtgaccaagggctgcag
ggaccacctggtgtgcctggaattactaaaaacggccgtgatggtgctcagggtgaaccc
gggctgccaggggatcctgggactcctggcactgttggggctcagggaactccaggaata
tgtgacacgtcggcttgcatgggagctgtcgcagcatcaacttccaaaaaatcataa

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