Serinus canaria (common canary): 103818867
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Entry
103818867 CDS
T05755
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103818867 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103818867 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103818867 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
scan00535
]
103818867 (COL9A3)
Proteoglycans [BR:
scan00535
]
Extracellular matrix (ECM) proteoglycans
Others
103818867 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103818867
NCBI-ProteinID:
XP_009091512
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAGISALGLLSLCQLLATASAQSLPRIGPQGPPGPPGPPGPSGKDGIDGEPGPPGLPGPP
GPKGAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPSGKGLPG
PPGPPGPSGLPGGQGFRGPSGPFGLPGFPGPPGPPGPPGLPGALPDGGGDLQCPALCPPG
PPGPPGMPGFKGHTGHKGEPGEVGKQGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMG
PAGDRGDIGFRGPPGIPGPPGKAGDQGTKGPQGFRGPKGDTGKPGPKGNPGARGLIGEPG
MPGKDGRDGAPGLDGEKGDAAPMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAG
PSGEPGIPGDVGIPGERGLPGPRGATGPLGLQGPIGARGVRGFQGPKGASGEPGLPGPTG
IRGETGDRGPLGAPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQG
PNGTAGAPGIPGHPGPMGHQGERGVPGITGKPGPPGKEASEQHIRELCGEMINEQIALLA
ANLRKPLAPGMTGRPGPAGPPGPPGSTGSVGHPGPRGPPGYRGPTGELGDPGPRGDPGEK
GDKGPVGQGIDGPDGDQGLQGPPGVPGITKNGRDGAQGEPGLPGDPGTPGTVGAQGTPGI
CDTSACMGAVAASTSKKS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatctctgctcttgggctcctctccctgtgtcagctcttggccacagcatca
gctcagtcccttccaagaattggaccacaaggccctcctggaccaccaggaccccctgga
ccatctggcaaggacggcattgatggagagccaggccctcctggtttgccaggcccacca
gggccaaaaggtgcaccagggaagcctggagctgcaggtgaagctggattgcctggtctt
cctggagtggatggtttaacaggaactgatggcccccctggcccaaatgggcctccagga
gaccgtggtgcattaggacctgctgggccacctggaccatctggcaaaggactaccagga
cctccagggcctccaggacccagtgggctcccagggggacaaggatttcggggcccttct
ggaccttttggtctgccaggattcccagggcctcctggaccacctgggcctcctggtctt
ccaggtgcccttcctgatggtggtggggaccttcagtgcccagctctgtgcccaccaggt
cccccaggccccccaggaatgccaggcttcaagggacacactggtcacaaaggagagcct
ggtgaagtaggaaaacaaggagaaaagggtaaccctggccctcctggccctccagggatt
cccggcagtgttggcctgcagggcccaagaggactgagaggcctccctggtccaatgggt
ccagctggcgacagaggtgacattggattcaggggccctcctggaatcccaggacctcca
gggaaagctggagaccaagggaccaaaggacctcaggggttccgggggcccaaaggtgac
actggtaaacctggaccaaaaggaaacccaggggctcgtgggctcataggagaacctgga
atgcctggcaaggacgggcgggatggagctcctggactcgatggtgagaagggtgacgca
gctcccatgggtgctcctggagagaaggggccaaatggacttcctggtctgcctggaaga
gcaggtattaaaggctcaaagggtgaaccaggcagccctggagagatgggagaggcaggt
ccctctggagagccaggcatccctggcgatgttggcatccctggtgagagaggtctgcca
ggacccagaggagcaactggaccactcggcctccaaggtcccataggagcccgtggtgtc
cgaggtttccaggggcccaaaggtgccagcggtgagcctggccttcctggcccgactggg
atccgtggagagacgggagacaggggtcctcttggtgctccaggtcccaaggggaaccag
ggcattgctggagcagatggcctcccaggtgacaaaggagagctgggtccctttggacct
cctggccaaaaaggagagccaggaaaaagaggagaacttggtccaaaaggtgtccaagga
cctaacgggacagctggagcaccagggatcccaggacatccaggacccatgggtcaccag
ggggagaggggtgtccctggcatcacaggaaaacctggaccccctggcaaagaggccagt
gaacaacatatcagagaactctgtggggaaatgataaatgagcaaattgcactgttggct
gctaacctgaggaagcccttggctcctggaatgacgggacggcctggcccagctgggccc
ccaggccctcctgggagcacggggagtgttgggcatcctggtcctcgtgggccccctggc
tacagagggccaacaggagagcttggtgatcctggacccagaggtgaccctggtgaaaag
ggagacaaaggacctgtgggccaaggcatcgatgggcctgatggtgaccaagggctgcag
ggaccacctggtgtgcctggaattactaaaaacggccgtgatggtgctcagggtgaaccc
gggctgccaggggatcctgggactcctggcactgttggggctcagggaactccaggaata
tgtgacacgtcggcttgcatgggagctgtcgcagcatcaacttccaaaaaatcataa
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