Serinus canaria (common canary): 103818959
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Entry
103818959 CDS
T05755
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan03320
PPAR signaling pathway
scan04148
Efferocytosis
scan04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103818959 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103818959 (RXRA)
03320 PPAR signaling pathway
103818959 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103818959 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scan03310
]
103818959 (RXRA)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103818959 (RXRA)
Nuclear receptors [BR:
scan03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103818959 (RXRA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
103818959
NCBI-ProteinID:
XP_009091617
UniProt:
A0A8C9MJ33
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All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMXXXXXXXMGPHSMSVPSTPSLGFGTSSPQLNSPMNSVT
STEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRT
VRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVES
TSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEW
AKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGV
GAIFDRVLTELVSKMRDMLMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEA
YCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccgctggatttctccaaccaggtgaattccacgtccctg
aactcccccaccagccgggggcccatggccaccccgtccttgcacccgtccatcgggccg
ggcatcggctcctcgctgggctcgccgggccagctgcactcgcccatcagcaccctgagc
tcgcccatcaacggcatgggcccccccttctccgtcatcagctcccccatggggccacac
tcgatgtnnnnnnnnnnnnnnnnnnnnatggggccacactcgatgtctgtcccctccacg
cccagcctgggcttcggcaccagcagcccgcagctcaactcgcccatgaactccgtcacc
agcacagaagacatcaagccacccctggggctcaatggagtcctcaaagtgccagcacat
ccctcaggaacgatggcctccttcaccaagcacatatgtgccatctgcggggacagatct
tcgggtaaacattacggggtttacagctgtgagggctgcaaaggcttcttcaagcgcacg
gtgcgcaaggacctgacctacacctgccgggacaacaaggactgcctgatcgacaagcgc
cagcgcaaccgctgccagtactgccgctaccagaagtgtctggccatgggcatgaagaga
gaagccgtgcaggaggagaggcagcggggcaaggaccgcaacgagaacgaggtggagtcc
accagcagcgccaacgaggacatgcccgtggagaagatcctggaggctgagctggctgtg
gagccaaagacagagacctacatcgaggcaaacatgggcctgacccccagctcgcccaac
gacccggtgacaaacatctgccaggcagcagacaaacagctcttcaccctggtggagtgg
gccaagaggatcccccacttctcagagctgcccctggatgaccaggtcatcttgctcaga
gcaggctggaacgagctgctgattgcctccttctctcaccgctccatcgccgtgaaggac
gggatcctgctggccacggggctgcacgtgcacaggaacagcgcccacagcgccggcgtc
ggggccatcttcgacagagtactgacagaactggtgtccaaaatgagggacatgctgatg
gacaagacagagctgggctgcctgcgagccatcgtcctcttcaaccccgactccaagggg
ctgtcgaacccggcggaggtggaggcgctgcgggagaaggtgtacgcgtcgctagaggct
tactgcaaacacaaataccccgaccagcccggcaggtttgccaagctcctgctccgcctc
ccagccctgcgatccatcggcctgaaatgcctggagcacctcttcttcttcaagctaata
ggcgacacgcccatcgacaccttcctgatggaaatgctggaagcgccgcaccaaatgact
tag
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integrated database retrieval system
