Serinus canaria (common canary): 103819171
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Entry
103819171 CDS
T05755
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
scan
Serinus canaria (common canary)
Pathway
scan04010
MAPK signaling pathway
scan04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103819171 (CACNA1B)
04020 Calcium signaling pathway
103819171 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103819171 (CACNA1B)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103819171 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103819171
NCBI-ProteinID:
XP_030086549
LinkDB
All DBs
Position
Unknown
AA seq
2372 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIPQGTAP
AETGSGSSYNMLKRAAIKKSKNDLIHAEEGSPFARASLKSGKNESSSYFRRKEKMFRFFI
RRMVKAQSFYWVVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYG
LGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSL
RNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILT
VFQILTGEDWNAVMYHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANA
QELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVN
SPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLD
RPLVVEPRGEGRNNITKLSPVDVQEVVEHPKPTSADGAEAPRKHHRHREKEKLAEQEKGD
VTKDESGEAGAGTKEERHRQHRSRSKEVEGGSKEGKSDRNRGQEGGKRHHRRGSVEEGAE
KEHRRHRSHRHSSDRPGKEGNGTANGARGERRSRHRGGSRSGNRDGEPGAKGDSGEEPHR
RHRLRNRALSTYESVEKDSGEKEGEAGEKEHRNHQPKENQCELEASGSGSGPGNVPVHTL
PSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFEN
KTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSI
ALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFI
VVSGALVAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
VLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREW
KKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFV
VFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQ
YKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLK
IIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTF
LQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPP
LGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDA
ELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGG
LCQPGPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWG
TQRTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRL
AAETQRSKARSPGSYLAPIPDTSPMKRSVSTLAPQRPHAMHLYEYSLERMPPEQGHHHHH
HRCHRRKEKKQKSLDRAAHHMADGQAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQR
FYSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGSPLLSTSGASTPCRGR
RQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALLRGEQQPPPPT
VARIGSDPYLGHRDAAADSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRR
VPNGYHYTLGLNTGPGARGRSYYHEADEDDWC
NT seq
7119 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaggccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaattatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggacgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgcgcaacggctggaacgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgattttgacctg
cggaccctgcgagctgtgcgggtgctgcggcccctgaaactcgtgtcaggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcattgggctggagttttacatgggcaag
ttccacaaaacctgcttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaactatggcatcaccaactttgacaacatcctcttcgccgtgctcaccgtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaacgacgctgcaggaaac
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcctatcaggtgaatttgccaaggagcgggagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcagatcgagcgcgagctcaacggctacctg
gagtggatcttcaaagcagaggaggtgatgctggccgaggaggacaagaacgcggaagag
aagtcccctttggacgggagggccgcctcggaagggccgattcctcaaggcacggcgccg
gcagagactggcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagc
aaaaatgacctgattcatgcagaagaagggtctccctttgcccgtgccagtttgaagagt
ggcaagaacgagagctcgtcctacttcaggaggaaggagaagatgttccgcttcttcatc
cggcgcatggtgaaggctcagagcttctactgggtcgtgctctgcgtggtggccctcaac
accctctgtgtggccatggtgcactatgaccagcccgagaagctgaccactgctctctat
ttcgcagagtttgtgttcctggggctgttcctcactgagatgtccctgaagatgtatggg
ctggggccaaggaattacttccactcttcattcaactgctttgactttggggtgatcgtg
ggcagtatctttgaggtgatttgggctgcagtgaagccgggaacctcctttggcatcagc
gtcctgcgcgccctgcggctgctgaggatcttcaaagtgaccaagtactggaattccctg
aggaatctggtggtctccttgctgaactccatgaagtccatcatcagtttgcttttcctg
ctgttcctcttcatcgtggtctttgctctgctggggatgcagctctttggagggcagttc
aatttccaagatgaaactccaaccacgaatttcgataccttccctgctgccatcctcaca
gtcttccagatcctgacgggcgaggactggaacgctgtgatgtaccacggcatagagtcg
cagggcggcgtccattctggaatgttctcctccatctacttcatcgtgctcaccctgttt
ggtaactataccctcctgaacgtcttcttggccatcgctgtggacaacctggccaatgcc
caggagctgaccaaggacgaggaggagatggaggaagccaccaaccagaagctggccctg
cagaaggccaaggaggtggctgaagtgagccccatgtcagcagccaacatctccatagct
gcttttgtaaagcaaactcgaggtactgtatctcgcagctcgtcagtctccagcgtaaat
tcacccaagcagcagaattcctccaaatccaagtcggtctgggagcagaggacgagccag
atccggatgcacaacttccgagccagctgcgaggcgctgtacaacgagctggaccccgag
gagcgggtccgctacgccaccacgctgcacatccgtcccgacatgaaaacccacctggac
cggccgctggtggtggagccccgcggcgaaggcaggaacaacatcaccaagctgagcccc
gtggatgtccaggaggtggtggagcaccccaaacccacctccgctgatggggcagaagcg
ccgcggaagcaccaccggcatcgggagaaggagaagctggcagagcaggagaagggagac
gtgaccaaggacgagagcggcgaagccggggctggcaccaaggaggagcggcaccggcag
caccggagccgcagcaaggaggtggaagggggcagcaaggaagggaaaagcgaccgtaac
agggggcaggaagggggcaagaggcaccaccggcggggctcggtggaggaaggggccgag
aaggagcaccgcaggcaccgcagccaccggcactcgtccgaccggccgggcaaggaaggc
aacggcaccgccaacggcgcccgcggcgagcggcgctcccggcaccgcggcgggtcccgc
tccgggaacagggatggagagcccggggccaagggggacagcggagaggagccccaccgg
cggcaccggctcaggaacagggccctgtccacctacgagtccgtggagaaggacagtggg
gagaaggagggggaggctggcgagaaggagcaccggaatcaccagcccaaggagaaccag
tgtgagctggaggccagtggcagtggcagtggccctggcaatgtccctgtgcacaccctg
cccagcacttacctgcagaaggtgcccgagcagccggaggatgccgacaaccagaaaaac
gtgaccaggatgattcagccccccctggacaaaaccaccactgtgaacatccctgtcacc
atcactgcccctccaggggaaaccactgtcattccaatgaacaacgtggagtttgagaac
aaaacagaggagaagaaagacgtcgatgacctgaccaaaaatgggcctaaaccaatcctg
ccttacagctccatgttcatcctcagccccacaaacccgatccgccgcctgttccactac
attgtcaacctgcgctacttcgagatggtgatcctgatcgtcatcgccctcagcagcatc
gccctggctgcagaggaccctgtccaggctgagtctcccaggaacgacgctctgaaatac
ctggattatatatttacaggagtcttcacctttgagatggtgataaagatgattgacttg
gggctgctgctccaccctggctcctacttccgtgacctgtggaacatcctggacttcatt
gtggtcagtggggccctggtggcttttgccttctcgagtttcatgggaggaaccaaaggc
aaggacatcaacaccatcaagtccctgcgagtcctgcgtgtgctcagacctctgaagacc
ataaaacgtctgccaaaactaaaggctgtctttgactgcgtggtgaactccctgaagaac
gtcctcaatatcctcattgtttacatgctcttcatgttcatcttcgccgtcatcgccgtg
cagctcttcaagggccgcttcttctactgcacggacgagtccaaggagctggagaaggac
tgcaggggtcagtacctcgattatgaaaaaaatgaggtggaggcacagcccagggaatgg
aaaaaatacgagttccactatgacaacgtgctctgggctctgctcacactcttcaccgtg
tccacaggggaagggtggccaactgtgctgaagcactcagtggatgccacctacgaggag
caggggcccagccctggctacaggatggaaatgtccatcttttacgtggtgtattttgtt
gtcttcccttttttctttgtcaacatctttgtggcgttaatcatcatcaccttccaggag
caaggagataaagtgatgtcagagtgcagcctcgagaaaaacgagagggcctgcatagac
tttgccataagtgccaagcccctgacccgctacatgcctcagaacaagcaatccttccag
tacaagatgtggaaattcgtggtgtcccctccctttgagtactttatcatggtcatgatt
gctctcaacaccatcgtcctcatgatgaagttctatgatgctccagaagcatatgaagaa
atgctgaaatgcctgaatattgtgtttacatccatgttttccatggaatgtgtgctgaag
atcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgattttgta
acagtgttgggaagtattactgatattttagtaacagagattgcggacacggacaacttc
atcaacctcagcttcctgcggctcttccgggcagccaggctcatcaagctcctccgccag
ggctacaccatccgcatcctgctctggacatttgtgcagtccttcaaggccttgccttat
gtgtgtctcctcattgcaatgctcttcttcatctacgccattattggcatgcaggtattt
gggaacattgccttagatgatgaaacctccattaatcggcacaacaacttccggaccttc
ctccaagccctgatgctcctgttcaggagcgctacaggggaagcctggcacgagatcatg
ttgtcctgcttgagcaacagagcctgtgaccccctctctggcctcaccaaaaaggaatgt
ggcagtgattttgcctatttctactttgtgtcgttcattttcctctgctccttcctgatg
ctgaacctgttcgtggcagtgatcatggacaatttcgagtacctgacccgggactcctcc
atcctcggcccgcaccacttggacgagttcgtgcgggtgtgggcggagtacgacccggca
gcctgcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtccccacct
ctaggccttgggaagaaatgcccagctcgtgttgcctataagcgcctggtgaggatgaac
atgcccatctcccctgaagatttaactgtgcacttcacctccacgctgatggccctgatc
cgcacagccctggagatcaaactggcctcaggaggtgtgaagcagcaccagtgtgatgct
gagctgaggaaggagatctcactggtctggcccaacctgtcccagaagactctggatttg
ctggtgcctcctcacaaacctgatgaaatgactgtggggaaggtctacgcagccctgatg
atatttgacttctacaagcagaataagaacagcagggagcaagtccagccccccgggggc
ctgtgccagcccgggccagtgtccctcttccaccccttgaaggccaccctggagcagacg
cagcccgcggccttcagcaacgccaaggccttcctgcgccagaagagctcggcctccctc
aacaacgggggagccttgccacccccggagggagggatcaaagagtccagttcttggggg
acccagcgcacccaggacgtgttttatgaaaccaggagcccagcttttgagcgagggcac
tccgaggagatccccattgagagggtggtagaaatgaaggagatcagccccacagttgcc
aacggagagccccagccaggcctggagagccagggccgggcggcctccatgccacgcctg
gctgctgaaacccagaggagcaaagcacggtcacctgggagttacctggcacccatcccg
gacacgagccccatgaagcgctcggtctccacgctggccccgcagcgccctcacgccatg
cacctctatgagtactccttggagcgcatgcctccggagcagggccaccaccaccaccac
caccgctgccaccggcggaaagagaagaagcagaagtccttggatagggccgcccatcac
atggctgatggacaagctgtagcccagtctggagagtcctcttccaaggacaagaagcag
gagcgtggccgctcccaggagaggaagcagcactcctcctcctcctccgaaaagcagcgc
ttctactcctgcgaccgctacggcagccgggaccgtgcccagcccaaatctgctgaccag
agcaggcccacctcgcccaacgggggcccagagcacggcccacacagacagggcagtggt
tcagttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccggggtcgg
aggcagctcccacagactccactgaccccacgccccagcatcacttacaagaccgctaac
tcctcgcccgtgcacttcaccactttccaaacccccacgttctccccgggccgcctgagc
cgtgggctgtccgagcacaacgcgctgctgcggggggagcagcagccgcccccgcccacc
gtggcccgcatcggctccgacccctacctgggccaccgcgacgccgccgccgacagcccg
cagcgtgccgcgcctgaggacacgctcaccttcgaggaggccgtggccaccaactcgggc
cgctcctcaaggacttcctacgtctcctccctgacctcgcagtcgcaccaaatccgccgg
gtgcccaacgggtaccactacacgctggggctcaacacgggccccggcgccagaggacgc
agttactaccacgaagccgatgaggatgactggtgctag
DBGET
integrated database retrieval system
