Serinus canaria (common canary): 103819208 Help Entry 103819208         CDS       T05755                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism scan  Serinus canaria (common canary) Pathway scan03430   Mismatch repair Brite KEGG Orthology (KO) [BR:scan00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103819208 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:scan03400]     103819208 (MSH6) DNA repair and recombination proteins [BR:scan03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103819208 (MSH6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV PWWP MutS_II Motif Other DBs NCBI-GeneID:  103819208 NCBI-ProteinID:  XP_009091923 UniProt:  A0A8C9NFD8 LinkDB All DBs Position Unknown AA seq 1262 aa AA seqDB search MEGYPWWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWISVKYLKPYKGSSDRET MKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCNEPSDTEEEEEEMEEMSENASGN SEDCNSEEDVKSGKRVMSRERAVKAKRRRVLDSDSDHDGSDVEFKPDGKEAASSEEASSG VDENESSDAETEAESVAESPVKVPSKRKRREVKKPAKRSSLGNECSETPKRAATVSSEAK SKLTSFAAPENFESQANACSGGTGGFSVWEHEKLDWLQEGKRRDAHRRRQGDPDYDPCTL YVPEDYLNKCTPGVRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTW AHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCRSAGHSSKFDKVVRREICRI ITKGTQTYSVMDCDPSENHSRFLLSVKEKEDAAGTRLYGVCFVDTSMGKFHVGQFPDDRH CSRFRTLVAHYTPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLTSGSQFWNASKTLKVLL EEGYFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQ ELLSQANFEEYVPVDITTAKTMSSSSLFGRTGQRMVLDGVTLMNLEVLQNGTNGSTEGTL LERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVTEYLKKLPDL ERLLSKIHSIGSPLKSQNHPDSRAIFYEELKYSKKKIADFLSTLEGFKVMNEIVEFMEEF ASDFKSRVLKQLVTRKAKNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKLGFDPDYD RALEDIRALEVDLRKYLDKQRKLLGSKSVQYWGTGKNRYQMEIPESVISRNLPEEYELRS SRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLD VLMSLAHYSQGGDGPLCRPVILLPTDNAPPFLELRNSRHPCITKTFFGDDFIPNDIVIGI KDEGSSSEASCVLVTGPNMGGKSTLMRQAGLLVVMAQLGCYVPAEACRLTPIDRVFTRLG ASDRIMAGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAER IRCRTLFSTHYHSLVEDYSHSGAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSY GFNAARLADIPEEVIQKGHRKAKEFEKTTISLRIFRYLCQVVDEATCDAGVVRKLTAMID RL NT seq 3789 nt NT seq  +upstreamnt  +downstreamnt atggaaggctatccctggtggccatgtctcatatacaaccaccccactgaaaggacaata gtcagaggaaaaggaaaatccactcgtgtccacgtgcagttctttgatgacagccctacg aggggttggatcagtgttaaatacctgaagccatataaaggttcatcagacagggagacg atgaagggaggtatgttttacagcacaaagcctgaaattaaaagagccatggtgctggca gatgatgccatgagcaaagataaaaccaagaggcttgaactggcagtctgcaatgaacct tcagacacagaggaggaggaggaagaaatggaggagatgagcgaaaatgcatcaggcaac agtgaagactgcaatagtgaggaggatgtgaaaagcggtaagcgagtgatgagcagggaa agagctgtaaaagccaagagaaggagagtgttggattctgacagcgaccacgatggctct gatgtggagttcaagcctgatgggaaagaagcagcaagcagtgaggaagccagtagtggg gtggatgaaaacgagtcttctgacgcagagacggaggcagagagtgttgcagagagcccc gtgaaagtcccttctaaacgaaagagaagagaggtgaaaaagcctgctaaaaggagtagc ctgggaaatgaatgttctgaaacacccaaaagagcagcgacagtctcttcagaagccaag tctaagctgacatcctttgcagcacctgaaaattttgaatctcaagcaaatgcttgcagt ggaggcactggtggcttctcagtgtgggagcacgaaaagctggactggctgcaggaaggg aagagaagagatgcacacaggaggcgtcagggggaccctgactacgacccctgcactctc tatgtgcccgaggattacctcaacaagtgcacgccgggcgtgcggaggtggtggcagctc aaaagccagaactttgacgccgtgatttgctacaaggtgggaaagttctacgagttgtat cacatggacgcggtcactggtgtcaatgagctgggcctgatctttatgaagggcacctgg gcccactcgggttttccagaaactgcgttcggccgattctccgatgtcctggtgcagaag ggctacaaggtggcgcgcgtggagcagacggaaacgcccgaaatgatggaagcgcgctgc aggtccgcgggccactccagcaagtttgacaaggtggtgcgccgggagatctgcaggatc atcaccaagggaacccagacctacagtgtcatggactgcgacccctccgagaaccacagc aggttcctgctgagcgtgaaggagaaggaggacgcggccgggacgcgcctctacggcgtc tgcttcgtcgacacctccatggggaagttccacgtcggccagttcccagatgaccgccac tgctccaggtttaggactttggtagctcactacacccctgtgcaggtgctgtttgagaag gggaacctgtctgtggacacacagaagatactgaaaggctcgcttgtttcttgcattcag gaagggctgacctcaggttcccagttctggaatgcatctaaaacactaaaagtccttctt gaggaaggatatttcaaggagaagcagaattctgaaaatggatgttctctgccctctgtg atcaaatctctgacttcagagagtgactccctgggattaactcctggtgaaaacagtgag ttagctttgtcagctcttgggggatgtgtcttctatctcaaaaaatgtctgattgatcag gagctgttatcacaggcaaactttgaggaatacgtccctgtggatatcactactgcaaaa accatgagttcaagtagtttgttcggcagaactggccagcggatggtgctggatggagtc accctgatgaacttggaagtcctgcagaatggaaccaatggaagcacagaaggtactttg ttggaaaggattgattcttgctgtacgccattcgggaagcgactcctgaaacagtggctc tgcgctccactttgtaatcctaaatctatcaatgatcgtttggatgctgtcgaggacctc ctggcagtgccagataaaatgtctgaagtcactgagtacctcaagaaactgcctgacctt gaaagactgctcagcaaaattcacagcattgggtcaccactcaaaagtcagaaccatcct gacagcagggccatcttctatgaagaactcaaatacagcaagaaaaaaattgctgacttt ctgtctaccctggagggattcaaagtaatgaatgaaattgtcgaattcatggaggagttt gccagtgacttcaaatccagagtcctgaagcagctggtcacccgcaaagccaaaaatccc gatggccgcttcccagacctgagtgcagagctcacgaggtgggacactgcctttgatcac aaccaggctcggaagacaggagtcattacccccaagctgggctttgaccccgattacgac agagcactggaggatatcagagctctcgaggtggaccttcggaagtacctggacaagcag cgcaagctgcttgggtccaaatccgtgcagtactgggggacaggcaagaaccggtaccag atggagatcccagaaagtgtcatctcccgtaacctgcccgaggagtacgagctgaggtcg agcaggaagggctacaagcgctactggaccaaggagatcgagaagatgctggctgccatg gtgaacgccgaggagcgccgcgacgccgccctcaaggactgcatgaggcgcctcttctac aacttcgacaagaacagcaaggactggcagacagctgtggagtgcattgctgtgctggat gtcttgatgtcccttgctcactacagtcaaggtggtgatggacctctgtgccgacctgta atcctgctgcctacagataatgctcctcccttcctggaacttagaaattcccgccatcca tgcatcacaaaaactttctttggggatgattttattcccaatgacattgtgataggcatc aaggatgaaggcagcagcagtgaggcctcctgtgtgctggtaactggccccaacatgggt ggcaaatctacactcatgagacaggctggtctcctggtggtcatggcccagctggggtgc tacgtgcccgcggaagcctgcaggctcacgcccatcgaccgcgtgttcacacggctcggc gcctccgacaggatcatggccggtgaaagtaccttctttgttgaattgagtgagacttct agcattctgcagcatgcaacagagcactcccttgttctcgtggatgaactgggcagaggc acggccacgtttgacggcacagccatagcgagtgcggtggtgaaggagctggccgagagg atccggtgccggacgctgttctccactcactaccactccttggtggaggactattcccac agcggggctgtgcgcctgggccacatggcatgcatggttgaaaatgagagtgaggatcca agccaggaaacaattacgttcctgtacaagttcattgaaggagcctgcccaaagagctac ggcttcaatgcagcaagacttgcagatattccagaggaagtcattcagaaggggcataga aaagccaaagagtttgaaaaaacaaccatctccctgagaatatttaggtacctgtgccag gtggtggatgaagcaacctgtgatgcaggcgtggttcggaaactcacggcgatgatcgac cggctttag

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