Serinus canaria (common canary): 103819297
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Entry
103819297 CDS
T05755
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
scan
Serinus canaria (common canary)
Pathway
scan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103819297 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scan03400
]
103819297 (MSH2)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103819297 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_27
MutS_I
DUF6437
Motif
Other DBs
NCBI-GeneID:
103819297
NCBI-ProteinID:
XP_018773516
UniProt:
A0A8C9ND77
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MNFESFVRDLLLVRHYRVEVYKNKAGSKSVKENDWYLAYKGSPGNLAQFEEVLFANNDMS
TAIGVVGVKLSAADGQRVVGVGYVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP
GGETAGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKEEQLNSAALPEME
KQVAVSSLSAVIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENANT
AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTRIEERLNLVEAFVMDPELRQCLQEDLLR
RFPDLNRLAKKFQRQAANLQDCYRMFQAINQLPNVVQALEKHEGAHQMLLLAVFITPLND
ICSDFSKFLEMIETTLDMEKVENHEFLVKASFDPNLTELREKMNELEEKMQSLLKTAAKE
LGLEAGKSIKLETNSQFGHHFRVTCKEEKALRNNSKYGIIDTQKNGVKFTNSKLSAINEE
YIKNREEYEEAQDAIVKEIINIASGYAEPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRP
LVLEKGQGRMVLRGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQT
GVIVLMAQIGCFVPCESAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTATEN
SLIIIDELGRGTSTYDGFGLAWAISEYIASKICGFAMFATHFHELTALADQVPTVNNLHV
TALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE
SEGEPPAKKLYREREEGEKIIQDFLCQVKALPLTDMSEEDIKVKLKQLRNDVLAKNNSFV
NEIISRTKVTS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaatcttttgtgagggacctgcttctggttcgtcattacagagttgaagtt
tacaagaacaaagcaggaagcaaatctgtcaaagaaaatgactggtatttagcttacaag
ggttctccaggaaatcttgcccagtttgaggaagttctctttgccaacaatgacatgtcc
acagccattggggttgtgggggtgaagctgtctgctgctgatggacagagggtagtagga
gtgggctatgtcgacactacactgagaaaattgagtgtttgtgagttcccagataatgat
cagttctccaaccttgaagctctactggttcaactgggcccgaaggagtgtgtgctgcca
ggaggagagactgcaggagagatggggaaactcagacaagtcattcagaggggaggaatc
ctgattacagacaggaagaaggcagatttcacaacaaaagatattgttcaggatctcaat
cgcttgttgaaatcaaaaaaggaagagcagctgaacagtgcagcactgccagagatggaa
aagcaggttgctgtttcatctttgtcagctgttatcaagtttttggagctgctgtcagac
gagtctaattttggacagtttgaactgactacatttgatcttagtcaatatatggttcta
gacaatgcagctgttcaagccctcaacctttttcagagttctgtggaaaatgcaaatact
gcacagtctcttgctggtttactgaataaatgcagaacccctcaaggacaaagactagtt
aatcagtggatcaaacaaccacttatggacaagaccagaattgaagagaggttgaatttg
gttgaagcttttgtgatggatccagagctacgtcagtgccttcaggaagatctgttacgt
cgctttccagacctcaaccggctggcaaagaaatttcagagacaagcagcaaacttacaa
gactgttaccgaatgttccaggccatcaatcaactgcctaatgttgtacaagctctagag
aaacatgaaggagctcaccagatgttgttgttggctgtatttataacacctcttaatgat
atctgctctgacttttcaaagtttctggagatgatagaaacaacattggacatggaaaag
gtggaaaatcatgaatttcttgtcaaggcttcttttgatcctaatttaacagaattaaga
gagaagatgaatgaactggaagaaaaaatgcagtccttactaaagactgcagccaaagaa
ctaggtttggaagctggcaaaagtatcaaactggagacaaattcacagtttgggcatcac
tttagggtaacttgtaaggaggaaaaagctctccgtaacaattcaaaatatggaatcatt
gatacacagaagaatggtgtgaaatttactaacagcaaactgagtgccatcaatgaggag
tatataaagaacagggaagagtatgaagaggctcaggatgcaattgttaaggaaatcatt
aacattgcttcaggttatgcagagcccatccagaccatgaacgatgtgatagcccagctg
gatgccattgtcagctttgcccacgtgtccaacggggccccggtgccctacgtgcggccg
ctggtgctggagaagggccagggcaggatggtgctgagaggggcccggcacccctgcatc
gaggtgcaggacgaggtggccttcatccccaatgacatcacctttgagaagggcaagcag
atgttccacattattactggacctaacatgggaggaaaatcaacatacatccgacagaca
ggggtgattgttctcatggcccagattgggtgttttgtgccctgtgagtctgcagaaata
accattgtggattgtatcctggctcgggtgggagcaggagacagccagctcaaaggagtg
tctactttcatggctgagatgctggaaactgcctcaatcctcaggacagcaactgaaaac
tccctgataatcattgatgagctgggaagaggaacttccacctatgatggctttggctta
gcctgggctatctcagaatacattgccagcaaaatctgtgggtttgccatgtttgctaca
cacttccatgagctcacagctcttgctgaccaagtgccaacagtaaataacctccatgtc
actgctctgaccagcgatgacacactcaccatgctttatcgtgtcaaggaaggtgtttgt
gaccagagttttggaatacatgtagcagagttggcagctttcccaaaacatgtgatagaa
agtgcaagagagaaagcattggagctggaggagtttcaaaacattggcaagtccaaggaa
tccgaaggagaaccaccagccaagaaattatacagagaaagagaggaaggtgaaaagata
attcaagattttctttgtcaagtgaaagcattgcccctgacagatatgtcagaagaagac
atcaaagtcaagttgaaacagctgagaaatgatgtgctggcaaagaacaacagttttgtg
aatgaaataatttctcgaacgaaagttacatcatga
DBGET
integrated database retrieval system
