Serinus canaria (common canary): 103819402
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Entry
103819402 CDS
T05755
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scan03016
]
103819402 (CDKAL1)
Enzymes [BR:
scan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
103819402 (CDKAL1)
Transfer RNA biogenesis [BR:
scan03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
103819402 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
103819402
NCBI-ProteinID:
XP_009092143
UniProt:
A0A8C9L1K2
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRQFVRRNVFPKVRKRNSQKNVQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNAAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEVYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRRSAQNGTKWKAQPSAEIPVKTQL
SSWMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggatattgaagacattgtgtcagcagaagat
ttgaagcctcacgatcggcagtttgtgagaaggaatgttttccccaaagtgcgaaaacgc
aactcccagaagaacgttcagacagatgatgagcccccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatac
atggctggacagctggccgcatatggatacaaaattacagacaacgctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgcgtaccacaagct
cagcctcgccaggagtacctgaaaggcttaagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttatcctattgaagaactggtggacagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccaagggtgtatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacata
atttgtggatttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
gtgtacaggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaagaaacagagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggtg
acagaagaatcctttgactccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccagtatcagatgccagagttcatactgcatccatc
agcagaccgttagcaaaaggagaagtttctggtttaacagaggagttccgacgttcagcc
cagaacggcacaaagtggaaagcacagccttctgctgagatcccagtgaaaacacagctc
agctcctggatggctttgcagctgccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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