Serinus canaria (common canary): 103819915
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Entry
103819915 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
scan
Serinus canaria (common canary)
Pathway
scan03013
Nucleocytoplasmic transport
scan03015
mRNA surveillance pathway
scan03040
Spliceosome
scan05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103819915
09122 Translation
03013 Nucleocytoplasmic transport
103819915
03015 mRNA surveillance pathway
103819915
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103819915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103819915
03041 Spliceosome [BR:
scan03041
]
103819915
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103819915
TREX complex
103819915
Spliceosome [BR:
scan03041
]
Complex C
Other components
EJC/TREX
103819915
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103819915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103819915
NCBI-ProteinID:
XP_030089106
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGXARGGGPGRGGVGGGRAGGGPVRNRP
VMARGGGRNRPAPYSQPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQ
ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS
QIDTQRRPAQSVNRGGMTRNRGVLGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaagctcaaccggagccagcgc
ggggccagccggggcggccggggtggccggggccggggcggcnacgcacgcgggggcggg
cccggccggggcggcgttggcggcgggcgcgcgggcggcggccccgtgcggaaccggccg
gtgatggcccgaggcggcggcaggaaccggcccgcgccctacagccagccgaagcagctc
ccggagaagtggcagcacgacctgttcgacagcggcttcggggcgggggccggcgtggag
accggcggaaagcttctcgtctccaacctggacttcggcgtctcggatgcggacatccag
gagctctttgcagagtttgggaccttgaagaaggcagctgtgcactatgacaggtctggc
cgcagcctaggaacggcagacgtgcattttgagaggaaggctgatgcactgaaggccatg
aagcagtacaacggggtgcccttggatgggcgccccatgaacatccagctggtcacgtca
cagatcgacacgcagcggagaccagcacagagtgtaaacagaggtggcatgaccaggaac
cgtggggtcttggggggatttggaggtggaggcaacaggcgagggactcgtggtgggaac
agagggagaggcagaggagctggaagaacttccaaacagcagctctctgcagaagaacta
gatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
