Serinus canaria (common canary): 103820110
Help
Entry
103820110 CDS
T05755
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103820110 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103820110 (PRPF8)
Spliceosome [BR:
scan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103820110 (PRPF8)
Complex C
U5 SnRNP specific factors
103820110 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103820110
NCBI-ProteinID:
XP_009092980
UniProt:
A0A8C9MVM8
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggcggctgcgccccggtgcccaacccgctggcgccg
ctgcccgactacatgtccgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgcgaccacggcgacatgaccaataggaag
ttccgacacgacaagcgcgtctacctgggtgctctgaagtacatgccccatgctgtgctg
aagctgctggagaacatgcccatgccctgggagcagatccgcgatgtgcccgtcctgtac
cacatcaccggcgccatctccttcgtcaacgagatcccctgggtcatcgagcctgtctac
attgcccagtggggctccatgtggattatgatgaggcgggagaaaagggacaggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaaccccctctggattatgctgat
aacatcctggatgtggagcccctggaagccattcagctggagctggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagcctctgaaggacaacaggaagtatgtg
aacggctccacgtaccagcgctggcagttcaccctgcccatgatgtccaccctgtaccgc
ctggccaaccagctgctcactgacctggtggatgacaactacttctacctgtttgacctg
aaagcattcttcacctccaaggcactaaacatggccattcctggaggtcccaagtttgag
cccctcgtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacagagtacaaaatcgctttcccatacctgtac
aacaacctgccacaccatgtccacctcacctggtatcatactccaaatgttgttttcatt
aaaacagaagatcctgacctcccagctttttacttcgatcctctgatcaaccccatttct
cacagacattctgtcaagagccaggaaccactgcctgatgacgatgaagagtttgagttg
ccagagtttgtggagcctttcctgaaggatacccctctctacactgataacacagccaat
ggcattgccttgctgtgggcaccacgacccttcaacttgaggtctggcaggacccggaga
gctcttgacatcccactggtcaagaactggtaccgtgagcactgcccagcaggacagcca
gtcaaggtgagagtgtcctaccagaagctcctgaaatactatgtcctgaatgcactcaaa
cacagacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctaccaag
tttttccagtcgaccaagctggactgggtagaagttggcctgcaagtgtgtcgccagggc
tacaacatgctgaacttgctgatccacagaaagaacctgaattaccttcacttggattac
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaagaaatcccgtttt
gggaatgctttccatctgtgccgagaggtcctgcggctgaccaagctggtggtggacagc
cacgtccagtacagactgggcaatgtggatgcatttcagctggcagatggcctgcagtac
atctttgcccacgtgggtcagctcacggggatgtaccggtacaagtacaaactgatgagg
cagattcgaatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggtttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcaccccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactccaagggtgtcgcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctcagggcagctgtgatgcacgacatcctggacatgatgccagaaggg
atcaagcagaacaaagccagaaccatcctgcagcacctgagtgaggcttggcgctgctgg
aaggccaatattccctggaaggtgccagggctgccaactcccattgagaacatgatcctg
aggtatgtgaaggccaaagctgactggtggacaaacacagctcactacaatcgggagcgg
atccgccggggagccactgtcgacaaaaccgtctgtaagaagaacctgggcaggctgacc
agactctacctgaaagctgagcaggaacgacagcataattacctgaaggatgggccttac
atcactgcagaagaggctgtcgctgtgtacacaaccacagtgcactggctggagagcagg
aggttctcccccattcctttccccccactgtcctacaagcatgacaccaagttgctgatc
ttagccctggagaggctgaaggaagcttacagtgtgaaatcacgcctgaatcagtcacag
agagaggagctgggcttgattgagcaggcttatgataatccccacgaagctctgtccaga
atcaagcgacatctgctgactcagagagccttcaaggaggtgggaattgagttcatggat
ctctacagccacttggtccctgtttatgatgttgagcccctggagaagatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaaggctcttccctccttggatc
aaacctgctgacactgaaccaccccctctgctggtgtacaagtggtgccaaggcatcaat
aacctgcaggatgtttgggaaacgagtgaaggggagtgcaatgtgatgctggaatctcgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtctcatc
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctacgggattattcgtgggctgcagtttgcttccttcatt
gtccagtactatgggctcgtgatggacctgctggtgctgggcctgcaccgggccagtgag
atggcagggcctccccagatgccaaatgacttcctcagcttccaggacattgccacggag
gtggcccatcccattcgcctcttctgcagatacattgacaggattcacatcttcttcagg
tttacagctgacgaggcaagggacttgatccagcggtacctgacagagcaccccgacccc
aacaatgagaacatcgtgggctacaacaacaagaagtgctggccccgggacgctcgcatg
cgcctcatgaagcacgacgtgaaccttggccgtgctgtgttctgggacatcaagaaccgt
ttgccccgctcggtgaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaag
gacaaccccaacctgctgttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggggtctggaacctgcagaacgaggtg
accaaggagcgcacggctcagtgcttcctgcgtgtggatgatgagtccatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctccacaaccttcactaagattgtc
aataaatggaacacagctctgattggcttgatgacttatttccgggaagctgttgtaaat
actcaggagctgcttgatttgctggtgaagtgtgagaataaaatccagactcgcatcaag
attggcctgaactccaaaatgcccagccgttttccacctgtggtgttctacacccctaag
gagctgggggggctgggcatgctctccatgggccacgttctcatccctcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcgggaatgagtcatgag
gaggatcagctcatccccaacctgtaccgttacatccagccatgggagagtgaattcatt
gactctcagagggtgtgggcagagtatgccctgaaacgacaggaggccatagcccagaac
aggcgtctgacactggaggatctggaggactcgtgggacaggggaattcctcggattaac
acccttttccagaaggataggcacactctggcttatgataaaggatggagagtcaggact
gacttcaaacagtatcaggtgctgaagcagaacccgttctggtggacacaccagcgccac
gatggcaagctctggaacctgaacaattaccgcacggacatgatccaggctctgggcggg
gtggaagggatcctggagcacaccctcttcaagggcacctacttccccacatgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcactctctggtggtctcct
accatcaacagagccaacgtgtatgttgggttccaggtgcagctggatttgacagggatc
ttcatgcacggtaaaatccctacgctgaagatttccctcatccagattttccgagctcac
ttgtggcagaagatccatgagagcattgtcatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcctac
aagatgaactcctcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatccttgctggcagattccaaggatgtgatggacagcaccaccacccagaagtac
tggattgacatccagctgcgctggggcgactacgactcccacgacatcgagcgctacgcc
agggccaagttcctggactacaccacagacaatatgagcatctacccctctcccactggg
gtgctcattgccattgatctggcctacaacttgcacagtgcttatgggaactggttccct
ggaagcaaacctctgatccagcaggccatggccaaaatcatgaaagcaaaccctgccctg
tatgtgctgagggaacgaatccgcaaagggctgcagctctactcctcagagcccacggag
ccctacctgtcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagggtcaccatccacaagacttttgaagggaatttgaccaca
aaacccatcaacggagccattttcatcttcaatcccagaactgggcagctcttcctgaag
atcatccacacttctgtgtgggcaggacagaagcgtctgggacagctggctaagtggaag
actgctgaagaagtggctgccttgatccgatccctccctgtggaggagcagccaaagcag
atcatagtgacacggaaaggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcggagttgcagctgcccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggccactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacagcattctcccgtctgatcctgattctc
cgggcactacacgtgaataacgatcgagccaaagttatcctgaagccggacaagacaacc
atcactgagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaacgtgaacgttgca
tccctgacccagtcagagatccgagacatcatcctgggcatggagatctctgccccatct
cagcagaggcagcagattgcagaaattgagaagcaaaccaaggagcagtcacagctgacg
gccacgcagacccgcacagtgaacaaacacggggatgaaatcatcacctccaccaccagc
aactatgaaacccagaccttctcctccaagactgagtggagggtcagagcaatctctgct
gccaacctccacctgcggacaaaccacatctatgtctcatcagatgacatcaaggagaca
ggttacacctacattcttcccaaaaatgtgttgaagaagttcatctgcatctcagacctg
cgggcccagattgcaggttacctgtatggagtgagccctccagacaacccccaggtgaaa
gagatccggtgcattgtgatggtgccccagtgggggacacaccagaccgtgcacctccca
gggcagctgccacagcacgagtatctcaaggaaatggaacctctggggtggattcacacc
caaccaaacgagtcccctcagctctcaccacaggatgtcaccacccacgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcatcatcacctgcagtttcacccct
ggctcctgcacactgacagcctacaagctgaccccgagcgggtacgagtggggccggcag
aacacggacaagggcaacaaccccaaggggtacctcccctcccactatgagagggtgcag
atgctcctgtccgaccgcttcctcggcttcttcatggtcccagcacagggctcctggaac
tacaacttcatgggtgtccgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccctctcacttcctcaacttcgcgctgctg
caggagggggaggtttactctgccgaccgcgaggatctctacgcctaa
DBGET
integrated database retrieval system
