Serinus canaria (common canary): 103820116
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Entry
103820116 CDS
T05755
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03030
DNA replication
scan03420
Nucleotide excision repair
scan03430
Mismatch repair
scan03440
Homologous recombination
scan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103820116 (RPA1)
03420 Nucleotide excision repair
103820116 (RPA1)
03430 Mismatch repair
103820116 (RPA1)
03440 Homologous recombination
103820116 (RPA1)
03460 Fanconi anemia pathway
103820116 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103820116 (RPA1)
03032 DNA replication proteins [BR:
scan03032
]
103820116 (RPA1)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103820116 (RPA1)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103820116 (RPA1)
DNA replication proteins [BR:
scan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103820116 (RPA1)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103820116 (RPA1)
MMR (mismatch excision repair)
103820116 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103820116 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
103820116
NCBI-ProteinID:
XP_009092985
UniProt:
A0A8C9MWF5
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEDERLSARCVCQVNRFIVNSLKDGRRVVILMDVTVLQTADQVGGPIGNPQPYNEG
QGQRSAAPAGNPAASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSAMKTPGGSQIKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISDLENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLVTIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTFEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggggccatcgcggccataatgcaaggggaggaagtctcc
aagcctgtgctgcaagtcatcaatacacgggctattgccacaggaactgggcccccacgt
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgttggcaacacag
ctgaactccctggtggaagatgaacgcttgtcagcccggtgtgtttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggtgatcctgatggatgtaacagtc
ctgcaaactgctgatcaggttggtgggcctattggcaatccccagccatacaatgaggga
caagggcaacgttctgcagctccagcaggaaacccagcagccagcaaaccacagcagcaa
aatggcaatttgtctggagcaggtcctgctgctcccaagtaccacgctccctccaaccag
tttggaaaagcgagtgctcccagtgccatgaagacacctggggggtctcagatcaaagtg
gtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgtgttacc
caaaaaggtcagatccgcacgtggagcaactctcgtggggaaggaaagctcttttccata
gagctcgttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactcattgaattgaacaaggtgtattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgacttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattacagtgaaagctaacaatagggaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacactgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcaggagcctgtctgtcctgtcctccagcacagttgtcatcaaccctgat
agcccagaggctttcaaactccgaggatggtttgactctgagggtcagcttctggagtgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaactggaaaact
ttgtttgaagccaaatctgagaacttgggacaaggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaactgcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcagaacggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaaataccgcctgatgctgctggtgaccattgcagactgtctg
gagtatcagtgggtgacttgttttcaagacacagcagaattcattcttggccaaaatgca
gctttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaat
gcaaacttcaacaccttcgagttcaggatccgggtgaaactggagacttacaatgatgaa
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagagaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctgggatga
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integrated database retrieval system
