Serinus canaria (common canary): 103820168
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Entry
103820168 CDS
T05755
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
scan
Serinus canaria (common canary)
Pathway
scan04142
Lysosome biogenesis
scan04144
Endocytosis
scan05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103820168 (CLTC)
04142 Lysosome biogenesis
103820168 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103820168 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103820168 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103820168 (CLTC)
Membrane trafficking [BR:
scan04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103820168 (CLTC)
Exosome [BR:
scan04147
]
Exosomal proteins
Proteins found in most exosomes
103820168 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
103820168
NCBI-ProteinID:
XP_030086986
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGC
QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAE
ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQSDFPVAMQISDKHD
VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVEE
ENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGI
LRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGYT
PDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDALK
NNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHFS
DLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYHE
QLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
LPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELI
NVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQL
AKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVET
ELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTL
VHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQLCGLHIVVHADELEELINYYQ
DRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFY
LEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLF
IIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKD
RLYKDAMQYASESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHNI
MDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPP
QAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgacaaattcatctgcatcagagagaaagtaggagaacaggctcaagtggtg
atcattgacatgaatgaccccagcaacccaatccggagaccaatttcagctgacagtgct
atcatgaaccctgccagtaaagtcattgcactgaaagctgggaaaacgctgcaaatcttt
aacattgagatgaagagcaagatgaaggctcacaccatgacagatgatgtcaccttctgg
aagtggatctctctgaacactgttgccctcgtgacggataatgcagtttaccactggagc
atggagggcgagtcccagcctgtgaagatgtttgatcgccactccagccttgctggctgc
cagatcatcaactacagaactgatgccaagcagaaatggctcttgctgactggaatatct
gcacagcaaaaccgtgtggtgggggcaatgcagctgtactctgtggacagaaaagtgtcc
cagcccatcgagggacatgcagccagctttgcacagttcaagatggaagggaatgctgaa
gaatccactctcttctgttttgcagtaagagggcaagctgggggtaagctgcatatcatt
gaggttggcacaccacccactgggaatcagccctttccaaagaaagctgtggatgtcttc
tttcctcctgaagcacaaagtgactttcctgttgctatgcagatcagtgacaagcatgat
gtggtgttcctcataacaaagtatggctacatccacttgtatgacctggaaactggcacc
tgtatctacatgaacaggatcagtggagagaccatttttgttactgcccagcatgaagca
acagctggaattattggagtcaacagaaagggacaggtgctctcagtgtgtgtggaagag
gagaacatcattccctacatcacaaacgtgctgcagaatcctgacctggctttacggatg
gctgtccgcaacaacctggcgggggctgaggagctctttgccaggaaattcaatgcactc
tttgcacaagggaactattcagaggcagcaaaagtggcagctaatgccccaaagggaatc
ctgcgtactccagacaccatacgccggttccagagtgttccagctcagccagggcagact
tcccctctcctgcagtattttggcattctgctggaccaagggcagctgaacaagtatgag
tcactggagctctgcagaccagtgctccagcagggccgcaagcagctcttggaaaaatgg
ttaaaagaagataagctggagtgctcggaggagctgggagaccttgtgaaatctgtggat
cccacgctagcgcttagtgtctatctgagagccaacgttccaaacaaggtcatccaatgt
tttgctgaaacaggacaagtccaaaagattgttttgtatgctaagaaggttggatatact
ccagactggatttttttgctgaggaatgtaatgagaatcagccctgatcaaggacagcag
tttgcacaaatgcttgttcaagatgaagagcctcttgcagatataacacagattgtggat
gtctttatggaatataatttaatccagcaatgtacagcctttctgctggatgcactgaag
aataatcgtccctcagaaggtcccctgcaaacacgtttacttgagatgaacctcatgcac
gctcctcaggttgcagatgccatcctgggaaaccaaatgtttactcactatgaccgggct
cacatagctcagctgtgtgagaaggctggtttgctgcagagagcactcgagcacttctca
gacctctacgacatcaagcgtgcggtggttcacactcacctcctcaaccctgagtggtta
gtgaattattttgggtccttatcagtagaagactctctggagtgtctgcgtgcgatgctg
tccgctaacatccgtcagaacctgcagatctgtgtccaggtggcttccaaataccatgaa
cagctgtcaacacagtcactcatcgagctctttgagtccttcaagagctttgaaggtttg
ttttatttcctgggctccattgtaaacttcagccaggatccagatgtgcacttcaagtac
attcaagctgcatgtaagacaggacagattaaagaagtggaaagaatctgcagggaaagt
aactgctatgatccagaacgtgttaaaaacttcctcaaggaagctaaactcactgaccag
ctgcctcttatcattgtgtgcgaccgctttgactttgtccacgacttggtgctgtatttg
tatagaaataatctccaaaaatatattgagatttatgtacagaaggtgaatcccagccgt
ctgccagttgttattgggggactgctcgatgtggattgctctgaagatgtgatcaagaac
ctcatccttgtagtgagaggtcaattttcaactgatgaacttgttgcagaggttgagaaa
agaaacaggctgaagctgcttctgccctggctggaagcaagaattcacgagggctgtgag
gagcctgccactcacaatgcactggccaagatatacattgacagcaacaacaacccagag
agattcctgcgtgagaacccctactatgacagtcgtgttgttggcaagtactgtgagaag
agggaccctcacctggcctgcgtggcttacgagcgtggacagtgcgacctggagctgatt
aatgtgtgcaatgagaactccctcttcaagagtctctcccgctacttagttcgtcgtaag
gaccccgagctctgggccagtgtgctgctggaaagcaacccctacaggagacccctgatt
gaccaggttgtccagactgctctgtcggagacccaggaccccgaggaagtctctgtcact
gtgaaggccttcatgactgcagatcttcccaatgagctcattgaactgctggagaaaatc
gttctggataattcagtattcagtgagcacaggaacctgcagaaccttctcatcctcaca
gccatcaaggctgaccgcacccgtgtcatggagtacatcaatcgcctggataactacgat
gcccctgatatagccaatattgctatcagcaacgagctttttgaggaggcatttgctatc
ttcaggaagtttgatgtcaacacatcagctgtgcaggtgttgatagagcacattgggaac
ctggaccgtgcgtacgagttcgccgagcgctgcaatgaacctgcagtgtggagccagctg
gccaaagcacagctccagaaggggatggtgaaggaagcaattgactcctacattaaagca
gatgatccttcctcatacatggaagttgttcaagctgctaatgccagtggaaactgggaa
gaactggtgaagtatctgcagatggcacgcaagaaggcccgggagtcgtacgtggaaaca
gaattaatctttgctcttgctaaaacaaaccgcctggcagagctagaggagttcatcaat
ggccccaacaatgcacatatccagcaggttggtgatcgctgctatgatgagaagatgtat
gaagcagccaagctcttgtacaacaacgtgtccaacttcggccgcttggcctcgaccttg
gtgcacctcggcgagtaccaggcagccgtggatggcgctcgcaaagccaacagcactcgc
acctggaaagaggtctgctttgcttgtgtggatggaaaagaattccgcctggctcagctg
tgtgggctccacattgtagtgcatgcagatgagctggaagagctcatcaactattaccag
gatcgtgggtactttgaagagctgatcactatgttggaagcagcacttgggctggagcga
gcacacatggggatgttcacagagctggcaattctctactccaaattcaagccacagaag
atgagggagcacttggagctgttctggtccagagtcaacattcccaaggttctgagagct
gcagaacaagcccatctctgggctgaactggtgttcctgtatgataagtatgaagaatat
gataatgccataatcacaatgatgaatcacccaactgatgcttggaaagaaggccagttc
aaagatatcatcactaaggtggccaatgtggagctgtactacaaggcagttcagttctat
ttggaatttaagcctctgctgctcaatgatctgctgatggtgttgtcccctcggcttgac
cacactcgtgctgtcacgttcttcacaaaggttaaacagctgcccctggttaagccttac
ctgcgctctgttcaaaatcacaacaacaaatcagtcaacgagtccctcaacaacctcttc
attattgaagaagattaccaggctcttaggacttctatagatgcttatgacaactttgac
aacatttctcttgcccaacgtttggagaagcacgagctcatagagttccggaggatcgct
gcctatctcttcaaaggcaacaaccgctggaaacagagcgtggagctctgcaagaaggac
aggctctacaaggatgccatgcagtacgcttccgaatccaaagatactgagctggcagaa
gagctgctgcagtggttcttgcaggagaacaagagggaatgctttggtgcttgtctcttc
acctgctacgatctcctaaggccagatgttgtcttggaaacagcgtggaggcacaacatt
atggactttgccatgccatactttatccaggtcatgaaggaatacttgaccaaggtggat
aaactggatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacct
attgtttatggccagccccagctgatgctgacagcaggacccagcgtggcagttcctccg
caggcacctttcggctatggctacacggcccctccctacgggcagccgcagcccggcttc
ggctacagcatgtga
DBGET
integrated database retrieval system
