Serinus canaria (common canary): 103820316
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Entry
103820316 CDS
T05755
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103820316 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103820316 (TRPV1)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103820316 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103820316
NCBI-ProteinID:
XP_018775003
UniProt:
A0A8C9UE57
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQEAPDNPQGPLSSRVHPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANITAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTIHITILTAAAYYRPVQKNEKPPFTFGYTTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNSSDSARCCHVKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNL
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKPPEEVKLKPVLEPYFEPENSEELKESI
PKSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatccttgggaagatgaagaagtttggcagttttgacatggaggagtctgaa
gtgacagatgaacacacagatggggaggactctgtccaggaagcccctgacaacccccag
ggccctctcagctccagggtgcacccacccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccatgtgaatttggagaggggcaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaacagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagaa
tatactgacaactactacaagggccagaccgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacatcactgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtgaccaagatgtataataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagctaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgcttgagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggagccccttaacaggctgctgcaagacaagtgggaccgctttgtcaagcacttgttt
tacttcaacttctttgtctacaccatacacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacaccactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttcagaggg
atccagtattttgtgcagaggcgcccatcactgaggaccctgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctgtacttctgt
ggccaggagctctacgtggcttccatggtgttctccttggcactgggctgggccaacatg
ctctactacacgcggggcttccagcagatggggatttactcggtcatgatcgccaagatg
atccttagagatttgtgtcgcttcatgtttgtctatctcgtattcctcttgggattttcc
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaatagctctgac
tctgccaggtgctgccacgtgaaacggggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaagttcaccattggcatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacattctc
ctgctcaacatgctcattgcactgatgggggagactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctatttg
aactgtctgaggcactccttccgctctgggaagcaagtcctggtggggatcacccctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaatctgggcatcatcaacgaagaccctgggtactctggggacctcagacgaaatctc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagccaccagaagaagtcaaatta
aaacctgttttggaaccttattttgagccagaaaattctgaggagttgaaagagtcaatt
ccaaagtcagcctaa
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