Serinus canaria (common canary): 103820423
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Entry
103820423 CDS
T05755
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103820423 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103820423 (CPSF3)
03019 Messenger RNA biogenesis [BR:
scan03019
]
103820423 (CPSF3)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103820423 (CPSF3)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103820423 (CPSF3)
U7-dependent histone pre-mRNA processing factors
103820423 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103820423
NCBI-ProteinID:
XP_009093335
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLSYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVNKISKKIDMDVYRKRMEIMLQDMFGEDCVSSKDDSVLCITVDGKTANISLDTRTV
DCEPGSEDDESLREMVELAAQRLYDALSPVY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagcgcaaagccgaggcgctgatcccagccgaggagagcgaccagctgctc
atacggcccctaggtgctggccaagaagtaggaaggtcttgcatcattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccatcctgggctagaaggaatggatgctctt
ccttacattgatttgatagatccagctgagattgatctcctccttattagtcacttccat
ttagatcactgtggggctttgccgtggtttttacagaaaacaagttttaagggaaggaca
tttatgactcatgccacaaaagctatttacagatggcttctttcagactatgttaaagtc
agtaacatctcagcagatgacatgctgtacacagaaacagacctggaagaaagcatggac
aagatcgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgc
taccacgcaggccacgttctgggagcagccatgtttatgattgaaatagctggtgtgaag
ctgttatatacaggtgatttctcaaggcaggaagacagacacctgatggcagctgagatt
cccaatattaaacctgatattcttataattgaatccacatatggcactcacattcacgag
aagagggaagagcgggaggcgaggttctgcaacaccgttcatgacatcgtcaacagaggg
ggccgaggcctcatccctgtgtttgccctgggccgagctcaagaactgctcctaatctta
gatgaatactggcagaatcatcctgaactccatgatatccctatatactatgcctcctct
ttggcaaagaaatgtatggcagtttatcagacgtatgtcaatgccatgaatgacaaaatc
cgcaagcaaattaacatcaacaatccttttgttttcaagcatattagtaatctgaagagt
atggatcactttgatgacattggcccgagtgttgtgatggcttccccaggtatgatgcag
agtggcttatccagggagctgtttgagagctggtgcacagataagagaaatggagtcatt
attgcagggtactgcgttgaaggaactcttgctaagcacatcatgtctgaacctgaagag
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaaccagtgaatttatccgggccctgaaacctccacac
gtgattttagttcatggtgagcagaatgaaatggccagattgaaagcagcattgatacgg
gagtatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacattaaacttcaggggagaaaaacttgccaaggtgatgggctctttagcagataag
aaaccagaacaaggacagagaatttctggaatcctagttaaaagaaattttaactatcac
atcctttctccatgtgacctctccaattacacggacttggcgatgagcactgtgacccag
acccaggccatcccctacacaggccctttcaatctgctctcttaccagctgcagaaactc
actggtgatgtagaagaaatagaaatccaacaaaaaccagccctgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacactgtgacaacagtgatactggaagttcagtcaaaccccaaaata
cagaaagctgcagtaaataagatttccaaaaaaatagatatggatgtatataggaagaga
atggagatcatgcttcaggatatgtttggagaggactgtgtgagttccaaagatgactct
gtgctgtgcatcaccgtggatggaaagactgccaacatttccctggacactcggacagtt
gactgtgagcctgggagcgaagatgacgaatcccttcgtgaaatggtggaactggcagca
cagaggctttatgatgccctcagtcctgtatactga
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integrated database retrieval system
