Serinus canaria (common canary): 103820442
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Entry
103820442 CDS
T05755
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04110
Cell cycle
scan04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103820442 (SMC1B)
04114 Oocyte meiosis
103820442 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103820442 (SMC1B)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103820442 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
103820442 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
103820442
NCBI-ProteinID:
XP_009093352
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MGYLKLLVVKDFKSWRGQQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRGSCSEFLFNDKSVSRSAYISE
LEKVGILVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWEYAEDYEQKKKKMQQAEQ
DAQFNYNKKKSVAAERKQARIEKEEAEHYQMLIKELDEERIQLQLFQLYHNEKQISFLKN
SLDEKNMEAHIKKEALSTAEDSFKVKKKMFGILNRDQQLMEKEMKTLEASLIQQRPLYIK
AKENTSYQIKKVEMSKKSLRDKEKACDKEKQNIKELEMELSDIEKAWRAFEEKTEEERMQ
RAAEIELGESQLQRYKELKEIARKKVATLAQQLEKLRWEDKGDQERLKLNRRKKSEIEET
IKQTVEQVEEHEKRIEKLEEYAKVCIGSLTEKKQQEEVLAKEIESATIRMAEVNEDLNKI
VGELQNAKIDYHEGRREQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIIVATEKIARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKEAKMMVDVVQT
QFAPLKKVVQFVSGNALICETIKEAKHIAFDGPVRLKTVSLDGTLFLKSGVISGGSSDLR
FKARCWDEKEINKMKERRDSLITELKDLMRIRRKEADLKQLRAQCQGTQTRLKYSQSELD
LIKKKHLANLFMEKSKLESELVNIEAQHDMLNEGIVQRKEKIKEFQKKINEVEDVVFQEF
CEEIGIENIRVYEQEHVRQQEEIDKRRLEFENQRTRLNIQLEYNRDHLQKLTNSVSRLRE
TIHKDEAEIIKLQKDEEKLLKKVNGLLEEQQHLKDRLRAHKAELAKSQNEVEEFRKTMLT
LNREATKLQREATALETSLEEMRLRRHNLLLECKVQDLKIKLLSGSLDDISEVEPGAEIE
GTQALLGIYEREEGIQIDYSTLEVELKELESDKDIEDQVKQMQQEIKSKEATLMKTAAPN
LRAGEKLQIARDKFQESIDAFENSRKEARICKQEFEEVKKRRYELFSRCFEHASIAIDRI
YKKLCRNSSAQAFLSPENLEEPYLEGIGFHCVAPGKRFMPMDSLSGGEKTVAALALVFAV
HSFRPAPFFVLDEIDAALDNTNIDKVSRFIREQAHEQFQMIVISLKEEFYCKADALIGVC
PEHDDIMFSQVLTLDLTEYPEEEEQDTAEKPSRASLFQ
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagctgctggtggtgaaggacttcaagtcgtggagggggcagcaggtt
atcgggcccttcatgaggttcaactgcatcatcgggcccaatggctcaggtaaatctaac
ataatggatgctgttagctttgtgatgtgtgaaaaaacatcaaatttgcgagttaaaagt
gttcgagaacttattcatggagcgcatgttggaaaacctgtttcttccacagctagtgtg
aagattgtatattgtgaggaagatggggaagaaaaaacattttcaagagttatccgtggt
agttgttctgagtttcttttcaatgacaagtctgtcagccgatctgcatacatatctgag
ctagaaaaagtaggcattcttgtcaaggccaggaattgccttatttttcagggaacagta
gagtcaattgcaatgaagaagccaaaggagagaactcaactttttgaacaaattagtaat
tcatgggagtatgctgaagactatgaacaaaagaagaagaaaatgcagcaagcagaacag
gatgcacagtttaattataacaagaaaaaaagtgtggcagcagaacgcaaacaagcaagg
atagaaaaagaggaggcagagcattaccagatgttaatcaaggaactggatgaagaaagg
attcagctgcagctttttcagctttatcacaatgaaaagcaaattagctttctgaaaaac
agtttggatgaaaagaatatggaggctcatatcaagaaagaggctctttctacagcagaa
gattcatttaaagtcaagaaaaaaatgtttgggatactaaacagggaccaacagcttatg
gaaaaagaaatgaagactctggaggcttcactgattcagcagagacccctctatataaag
gcaaaggaaaacacatcctaccaaatcaagaaagtagaaatgtctaaaaaatctctaagg
gataaggagaaagcctgtgataaggaaaagcagaacataaaagaactagagatggaattg
agtgatattgagaaggcatggagagcatttgaggagaaaactgaggaggagagaatgcag
agagcagcagaaattgagctgggagaaagtcagttacaacggtacaaagagctaaaggaa
atagcaagaaagaaagtagctacactagcccagcagctagaaaaacttcgttgggaggat
aaaggagatcaagaaaggctgaagcttaatcgcaggaagaaaagtgaaattgaggaaacc
attaaacagactgtggaacaggtagaagagcatgaaaaacgcatagagaagttggaagag
tatgctaaagtttgcattggatcactaacagaaaaaaaacagcaggaggaagtgctggct
aaggaaattgagagtgcaacaatacgaatggctgaagtgaacgaggacttgaacaaaata
gttggtgaactgcagaatgccaaaattgattaccatgaaggaaggcgtgagcagatgaga
gcagagatcctggaaagtctaaaaaggctctatccagattctgtgtttggaagattgctt
gacctgtgtcatcctattcataaaaaataccagcttgctgttaccaaggtattcagcaaa
tacatgactgccattattgttgccactgaaaaaatagcaagagattgcattcggttccta
aaacaagaacgagctgaacctgaaacttttcttgctttggattaccttgatgttaaacca
attaatgagaagctaagggagataaaagaagctaaaatgatggtggatgttgtacaaacg
caatttgctccactgaaaaaggtggttcagtttgtgagtgggaatgctttgatctgtgaa
acaattaaggaagcaaaacacattgcatttgatggaccagtgaggttgaaaacagtgtct
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagtgatttaaga
tttaaagctagatgttgggatgagaaagaaattaataaaatgaaagaaagaagagatagc
ttgattactgagttaaaggacttaatgaggatcagacggaaggaggctgacttgaagcag
ttgcgtgctcagtgccaaggaactcagacacgacttaaatattcacagagtgaattagac
cttattaaaaagaaacatcttgccaatctcttcatggaaaaatcaaaactggaaagtgaa
ctggtaaatattgaggctcagcatgatatgctgaatgaaggaatagtgcaaagaaaagaa
aaaataaaagagtttcagaaaaaaattaatgaggttgaagatgttgttttccaggaattc
tgtgaagaaattggtatagaaaatattcgtgtgtatgaacaagagcatgtgagacaacaa
gaggagattgataagagaagactggagtttgaaaatcagaggacacgactgaacattcag
ctggagtataatcgtgatcatctacaaaaattaacaaactcagtcagcaggttgagggag
acaattcataaagatgaagctgagattatcaagctacagaaggatgaggaaaaacttcta
aaaaaagtgaatggacttttggaggagcagcaacaccttaaggatagattaagggctcat
aaagctgagcttgcaaaaagccaaaatgaagttgaagagttcagaaagacgatgttaact
cttaatagagaagccacaaagttgcagagggaagctacagctctagaaacctcactggaa
gagatgagattaaggagacataatctgctgcttgaatgcaaggtgcaggacttgaaaatc
aagttactgtctggatcactggacgacatcagtgaagtagagccaggagctgaaatagaa
ggaacccaggctcttttagggatctatgaaagggaagagggaattcagatagactacagc
accctcgaagttgaactaaaggaactagaatctgataaagacatagaggatcaagtgaag
caaatgcagcaagaaatcaaatctaaagaggccacattaatgaagacagctgctccaaac
ctgagagcaggagagaagttacagatagcgcgagacaagttccaagaatcgatagacgct
tttgagaacagcagaaaggaggccagaatatgcaaacaggaatttgaagaggtgaaaaaa
agaagatatgagctgtttagcaggtgctttgagcatgcctccatagccattgacaggatc
tacaagaagctttgcaggaacagtagtgctcaggccttccttagtccagaaaatcttgag
gagccctatctggaaggcattggctttcactgcgtggctccgggcaagcgctttatgccc
atggacagtttgtcaggaggggaaaaaacagtggcagccctggctcttgtgtttgctgta
cacagttttcgtccagctcctttttttgttttggatgagatagatgctgcactggacaac
acaaacattgataaagtctcaaggttcattagagaacaggcacatgaacagttccaaatg
atagttatttccctgaaggaagagttttattgcaaggcagatgcattgattggagtgtgt
cctgagcacgatgatattatgttcagccaagtcctgaccctggatcttaccgagtaccca
gaggaggaagagcaggacacagcagagaaacccagccgtgcttctctcttccaatag
DBGET
integrated database retrieval system
