Serinus canaria (common canary): 103820553
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Entry
103820553 CDS
T05755
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103820553 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103820553 (HBS1L)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103820553 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
103820553
NCBI-ProteinID:
XP_009093494
UniProt:
A0A8C9NA56
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPAILSEPLEEEYG
YEGTDAAADCLTPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDTKFDVQKAL
DLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSARMESEIVPKIAKMTVSGKKQSMGF
EVPCAIAEENGHTNTPQKGLLPEDASVASGVLEAVSTSAPSPQVMQVSEEQNMVATPAKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggatataactacgacgaagactttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagctcagttt
atttactccagacgagacaaaccagccatattgtctgagccattagaagaagaatatggc
tatgaaggtactgatgctgctgctgattgtttaacacccactcatcagttgactgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtccata
ccagaacaaacaatggtgcaagcagtactggatactaaatttgatgtacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataaggatgctgtg
attttagcaaagactacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaaattgccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgcgattgctgaggagaatggccacactaatacacctcagaaaggactg
ttacctgaagatgccagtgtagcttctggagtacttgaggctgtctcaacatctgctcct
tcaccccaagtaatgcaggtttcagaagaacagaatatggtggctactccagcaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcagctgctgaatttggtggtaataggacatgttgatgcaggcaaaagtactttaatg
ggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgagacaccaact
aaagtaattacactgatggatgctccaggccacaaggacttcattccaaatatgatcaca
ggagctgcacaggctgatgtggcaattttggttgtggatgccagcagaggagagtttgag
gcaggttttgagactggaggacaaactcgagaacatggattattagtgcgctctcttgga
gtgacacagttggctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttcaggaaattacgagtaagcttggccaatttcttaagcaagctggctttaaggaatca
gatgtagcttatatcccaacaagtggccttggtggagaaaatctagtcacaaggggtcag
tcaagtgacctcacacaatggtataaaggaaagtgtttgttggagcaaattgattctttc
aagccaccacagagatcagtggataaaccatttagactgtgtgttgctgatgtttttaaa
gaccaaggttcaggattctgtgtgactggtaaaatagaagcaggctatattcaggttgga
gaacgacttctggcaatgcctcctaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcggttcagagctcgggttctcatcttcaatattgaggttccaatcactaaagga
tttcctgtgcttttacactatcaaacagtaagtgaacctgctactattacaagattgttg
agtgtcctgcacaaaagtactggtgaagtgacaaagaaaaaacctaagttcttggctaaa
ggccagaatgctctaatagaactacaaactcaaagacctgttgctctagagttgtacaaa
gattttaaagagctggggaggtttatgttacgctacagtggttccactattgctgcagga
gttgttacagagattaaagaatga
DBGET
integrated database retrieval system
