Serinus canaria (common canary): 103820665
Help
Entry
103820665 CDS
T05755
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103820665 (DDX1)
03016 Transfer RNA biogenesis [BR:
scan03016
]
103820665 (DDX1)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103820665 (DDX1)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103820665 (DDX1)
Transfer RNA biogenesis [BR:
scan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103820665 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
103820665
NCBI-ProteinID:
XP_009093641
UniProt:
A0A8C9NIB7
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYVGLCKAPEGSVVKSQHSGNAQVVQAQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKIN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggctgctccctacagatatccaagcagaatccatcccgttgatcttaggaggtggt
gatgtgcttatggctgctgaaactgggagtggaaaaactggtgctttcagcattccagtt
atccagattgtttatgaaacactgaaggaccaaatggaaggcaagaaaggaaaagccact
attaaaactggaggggcagtgctcaataaatggcaaatgaacccctatgacagaggatca
gcttttgcaattggatcggatggtttgtgttgtcaaagcagagagataaaagaatggcat
ggatgcagagcaaccagaggagtgactaaagggaaatactactatgaagtttcctgtcat
gatcaaggcttgtgcagagtcggttggtcgactatgcaggcttcactagatctgggcact
gataaatttggctttggatttggtggcactggtaagaaatctcacaacaaacaatttgac
agctatggtgaggaattcactatgcatgatacaattggctgttacctagacacagaaaaa
ggacaaataaaattttctaaaaatgggaaggaccttggccttgcttttgaaatcccacca
catataaggaaccaagcactttttgcagcttgtgtactgaagaatgccgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagatggctatgttggcctttgcaag
gctcctgagggtagtgttgtaaaatcacaacactcaggaaatgcacaagtggttcaagca
cagaaccttccaaatgctccaaaagcattgattgtagaaccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggaa
ctgcttattattggtggagttgctgcaagagatcagctctctgtactggaacaaggtgtg
gatattgttgttggaactcctggaaggctggatgacctggtctcaacagggaagattaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccatagtcaaattcctcagataacctcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactgcattcttttgatgtgaaaaaactatctgaa
aaaatcatgcattttcctacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatccaaaaacggataaactctgggaaaggctcggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacacgacctggcgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacactgttcgagca
atcaaagagcacaagatggatcaagccattatcttctgcaggactaaaatagactgtgat
aatatggagcaatacttcatccagcagggtggaggccctgataggaagggacatcaattc
tcatgtgtctgtctgcatggtgatagaaaacctcaagaaagaaagcaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacggatgttgctgcgagaggaattgat
attcatggtgttccatatgttatcaacgtgacactccctgatgaaaaacagaactatgtt
catcggatcgggagagtcggcagagctgagaggatgggtttggcaatctcccttgtggca
aaagaaaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaagggtgttataac
actaggctgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtacca
gtggatgattttgatgggaaagttacatatgggcagaagagagctctgggaggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
DBGET
integrated database retrieval system
