Serinus canaria (common canary): 103820776
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Entry
103820776 CDS
T05755
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X5
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan04120
Ubiquitin mediated proteolysis
scan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103820776 (UBE4B)
04120 Ubiquitin mediated proteolysis
103820776 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
103820776 (UBE4B)
Enzymes [BR:
scan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103820776 (UBE4B)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
U-box type E3
103820776 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
103820776
NCBI-ProteinID:
XP_009093767
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPTTPLTSPQRETPPGPPGAAPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLMLNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSV
ATPAVPPISVSSQLPAASPSWTQPCSPRYRPYTVAHSGGSAAAAATPRSLSISIPSSSPS
PPAMAAGPAAMPVITSRHRPTAMGPPLFTASPGALRRRPSLQSRIPPSVGGSGSSSVSDS
CSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALV
LQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVAS
KECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYL
GAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNG
DTREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYI
FHPRCRIELPTDETRVKATMEEVAAWIAELYRDPSLFSEPKFPTECFFLTLHAHHLSILP
SCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACAD
AGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPEVPKVFASLPEFYVEDVAEF
LFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQK
FFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHG
TFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQA
RQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGP
KCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMR
KAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGT
IMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccggcggaggcgcctggcgcggctggcaggaggc
tcctcgtcccagcccaccaccccgctgacgtccccgcagagagagaccccgccggggccg
ccgggcgcagccccagcgccggggccctcgcacagcctgggcctcaatgtgcacagcatg
accccagctacctctcccatcggggcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctc
tctcggtctcagagcatggacattgatagtgtctcctgtgagaaaagtatgtcccaggta
gatgtggattcaggaattgagaacatggaggttgatgagaatgatcgcagagagaagcgg
agtctgacagacaaggaacctctgtcagggtcagaagtgtcagaggaacaagctctacag
ctggtctgtaagatcttcagagtctcttggaaggacagagacagagacgttattttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgattgggcagattttgatggaagtgctgatgatgtccacccaggcaagggatgagaac
ccctttgccagcctgacagccacctcccagcccattgctgcagctgcccgctctcctgac
agaagcctgatgttaaatatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttgtccagtctctatgggactagtccagctcctcctacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccaccccagcagtgcctcccatttctgtcagctctcagctgccagcagccagcccctcg
tggacacagccttgctctccgcggtaccgcccctacaccgtggcccattccggaggctct
gctgctgctgctgccaccccgcgctccttgagcatttccatcccatctagctctccaagt
cctccagccatggctgctggccctgcagccatgccagtcatcacatccagacacaggccc
acagccatgggcccacctttgtttactgcttcacccggtgccttgcgcaggcgtccttcc
ttacagagcaggattcctcctagtgtgggaggctctggcagctcgagtgtttccgattcc
tgcagtgaccacttcaccattgaaaactgtaaggagacagagatgctgaactacctcatt
gagtgttttgacagggttggaatagaggagagaaaagcaccaaagatgtgtagccagcca
acagttagccagttactgagcaacatcagatcccagtgcatttcacacgctgctttggtg
ctacagggatccttaacacaaccaaggtcattgcagcagcagtctctgctggtgccatat
atgctgtgtaggaatctcccgtttggcttcattcaagaattggtgagaacaacttaccag
gatgaagaggtgttcaaacagatctttattcccatcttacaaggcctggctgtggcttcc
aaagagtgctccctcgatagtgacaattttaaatatccccttatggcactatgtgaactt
tgtgaaatcaagtttgggaaaacacaccccatgtgcagtttggttgtctctttgcccttg
tggttgcctaaatctttaagcccaggtgcaggaagagaactgcaaagactttcctacctt
ggagccttcttcagtctgtctgtctttgctgaagatgataacaaagtagttgagaagtac
ttctcagggcctgccattactcttgagaacacccgggttgttagccagtctttgcaacat
tacctggaattagcaaggcaagagctgttcaagatcctgcacagtatcctgctgaacggg
gacacccgggaggcagctctcagctacatggcagctgtggtcaatgccaacatgaaaaag
gcccaaatgcagacagacgatcgtttggtgtccacagatggcttcatgctcaacttcctc
tgggtactgcagcagctgagtacgaagataaagctggaaacagttgatcccatgtacata
ttccatcccaggtgtcgaatcgagcttcccacagatgagacaagagtgaaagcaacaatg
gaggaggttgcagcctggattgctgaactttacagggatccgtctctgttttctgagccg
aaattcccaacggaatgtttcttcctcaccctgcacgcccaccacctgtccatcctgccc
agctgccgtcggtacatccgcagactgcgggccatcagggagctcaacaggactgttgaa
gatttgaaaaacaatgaaagtcagtggaaggattctcctctggccaccaggcatcgagag
atgctgaaacggtgcaagacacagctcaagaaactggtgaggtgtaaggcttgtgcagat
gctggtttgctggatgaaaacttcctcaggaggtgcctgaatttctatggcatggtgatt
cagctgatgcttcgcattcttgaccctgcctatcccaacataaaattgcctttaactcct
gaggttccgaaagtatttgcatcattgccagagttttacgtggaagatgttgctgaattt
ttattttttattgtacaatatgctcctcaggtgctgtatgagccctgtactcaggacata
gtgatgttcctcgttgtgatgctgtgcaaccagaactacatccgcaatccttatttagta
gccaagctggtggaagtgatgttcatgacaaatccagctgttcagccccgcacacagaag
ttctttgaaatgattgagaatcaccctctctccactaaattgttagtcccctccttgatg
aagttttacacagatgtggaacataccggagccactagcgagttctatgacaagtttaca
atccgctaccacatcagcaccattttcaaaagcctctggcagaacatagctcaccatggt
acatttatggaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgata
aatgacacaactttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtg
caagaggagatgaagaataaagagcaatgggacctgctgcccagggatcagcagcaggcc
cggcagtcgcagctggctcaggatgagcgcgtgtcccgttcatatcttgccctggcaaca
gaaactgttgatatgttccatatccttaccaagcaggtccaaaagccttttctcagacct
gaacttggaccacgactggctgctatgttgaactttaacttacaacaactgtgtggcccc
aagtgccgtgacctgaaagttgaaaacccagagaaatacgggtttgaaccaaagaagctg
ttggaccaactgactgacatttatctgcagctggattgtgctcgctttgctaaggcaatt
gctgatgatcagaggtcctacagtaaagagctctttgaggaggttatctccaagatgagg
aaggctggaatcaagtctaccatagcaatagagaaattcaaactgctggcagagaaagtg
gaggaaattgttgccaagaacgcccgtgcagaaattgattacagcgatgctccggatgaa
ttcagagatcccctgatggacacgctgatgaccgaccctgtgaggctgccctcgggaacc
atcatggacaggtccatcatcctgaggcacctgctgaactcctccactgaccccttcaac
cgtcagacgctgacggagaacatgctggaaccagtgccagaacttaaagagcaaatccaa
gcctggatgagagacaagcagaatgaccattaa
DBGET
integrated database retrieval system
