Serinus canaria (common canary): 103820857
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Entry
103820857 CDS
T05755
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103820857 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103820857 (EXOSC10)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103820857 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
103820857
NCBI-ProteinID:
XP_009093882
UniProt:
A0A8C9MIP5
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MAAAGREGSPVGQAGSSGMPAGTEGSSTTSALPGFDSPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYRSFPGFRAFCSTQSDRLLRCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEASGVNRNQQPVLPAGLQPPQMIVSSWNRKAGEFHKRTQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKIFIKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMNILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCSVDA
DKKYQLADWRIRPLPEEMIRYAREDTHYLLYIYDKVRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKECQGIIACCNPVPPLVRQQINELHLLIQQAREMPLLKSEITSVRKRAPP
PNPEKLENALFGPHDSSRIPMDHFQNNSALDPALVLEDVCLFSDSEKTMDIQDSQPESTC
LVATTTVSIFSECDENEGNKKTLTTAQRKAQLIMESFENPFKMYLPPEENSAYVSQSAKF
DPSSKIYEISNRWKLMSQAPVQKKSKTETNKKAAQQSAAHVQTQKLNKKAAQNVVSVRQQ
AMQEQANRKKERDTSEMGAETGAELPTQEKKRQKKTQQPEELEALRQFTPFDYSNSSFKV
FAGGSKSKQSPQFDPAKQAYTGKKFAGANKLQQSGNRSMSYLVGKAERGSTHHWPKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagccggccgtgaggggagcccggtggggcaggcgggcagctccgggatgccc
gcgggcacggagggaagcagcacgacgtcggccttgcccggattcgacagccccgacgcc
ttcgtcaagtatgctctcgggacggtggtggctgcaacaaaggcatccaatgggctcccc
cagcctggagatgagtatgatttctaccgcagcttccctgggttccgtgccttctgcagc
acacagagcgaccgcctgctccgctgcatgagccaggtgatgcagtaccacggctgccgg
agcctcatgaaagattccagcaaagtgacagggctggaagataaatttgatatgctggtt
gactccaatgatgtcattcttgaaagagtgagtattttattggatgaagcatcaggagtg
aatagaaaccagcagccagtcctgccagctgggttacagcccccacagatgattgtttcc
agctggaaccgtaaggcaggagaattccacaaaagaactcagtctgaaacattccgactg
cttcatgccaagaatatttctcgaccacagctgaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaaatttttatcaaaccaaatgctttgaagcctttgcctgaa
gccctcacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
catccttaccagtatgaactggaacatttttctccaccagatgaagttctcaagaaacct
gaactccagatgtacaggcccatcgaggaaacaccctgtcattttatcaccacactggat
gagttggtagaactaaatgaaaagcttatgacttgtaaagaatttgccttggacttagag
caccactcctacaggagcttccttggcttgacgtgtctgatgcagatttccacccgaaca
gaagacttcattattgatacactggaactgcgcagtgacatgaacatcctcaatgagacc
ttcacagaccctgcaattgtgaaggtccttcatggtgctgattcagacgtggaatggctg
caaagagactttggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaatcttggcagacattctttggatcacttgctaaagctgtattgcagtgtagatgct
gacaagaagtaccagctggctgactggagaatacgccctttgccagaagaaatgatccgg
tatgcccgtgaagacactcactacttgctctacatctatgataaagtgagggagttgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgaatcctaccttgatctctac
aggaggcagaaaaaacaccttgatacccaacagctggcagcatttaggctgctgtttgca
tggagagacaagatagcacgtcaagaggatgagagcacagggtatgtgctaccaaaccat
atgctgttgaagatagcagaggagctgcccaaagaatgccagggtatcattgcttgctgt
aaccctgtcccaccacttgttcgccagcagattaatgaattgcatctgctcattcagcag
gcccgagagatgcctcttctcaagtctgagattacttcagtcaggaagagagcacctcca
cccaaccctgagaagctggagaatgccctctttggaccacatgacagttcacggattcct
atggatcatttccagaataactctgccttggaccctgcacttgttttggaagatgtttgt
ctcttttcagacagtgagaagacaatggatattcaagacagtcagccagagtcaacatgt
cttgttgctactaccactgtcagcatattcagtgaatgtgatgaaaatgaaggaaataag
aagactttgacgacagcacagcggaaagctcagctaataatggagtcctttgaaaatcca
tttaaaatgtatctacctccagaggagaattctgcctatgtctcacaatctgcaaagttt
gacccatcatcaaaaatttatgaaatcagcaatcgatggaagttgatgagtcaggcacca
gtacagaagaagtccaagactgaaaccaataagaaagcagcccagcagtcagctgcccat
gtccagacacaaaagttgaataaaaaagcagcacagaatgttgtatctgttcgccagcaa
gccatgcaggaacaagctaataggaagaaggagagagacacaagtgaaatgggagcagaa
acaggagcagagctgccaacacaagaaaagaaacggcagaaaaaaacccagcaaccagag
gagctggaagcactaaggcagtttaccccctttgattacagcaattccagcttcaaagtg
tttgcaggaggcagcaaatcaaaacagtcaccacaatttgatcctgccaagcaagcttac
acaggcaagaaatttgctggagctaacaaacttcaacagtctggaaaccggagcatgtcc
tacctggtggggaaagctgaaaggggttcgacacaccactggccaaagagataa
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