Serinus canaria (common canary): 103820930
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Entry
103820930 CDS
T05755
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103820930 (CHD5)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103820930 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
103820930
NCBI-ProteinID:
XP_030086465
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
DDADNEEDVSEEDDGVLEGLDEFFAEDQVVVQKKKKSKKLKDGKAAKIKRRKKEGSNDEM
SENEEEMEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNEDGSLKEPKSSA
QLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREF
SANNPFKGSSAAAAAAAVAAAVETVTISPALPASPQPSALPTVVRKAKTKEGKGPGVRKK
IKGSKDGKKKGKGKKMAGLKFRFGGISSKRKKGSSSEEEEREESDFDSASINSSSVRSEC
SAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELE
KAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEEDDHMEFCRVCKDGGELLCCDTCP
SSYHLHCLNPPLPEIPNGEWLCPRCTVMPXXXXXXXPPPAPPPPAADPQPALPPPKALEG
IPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQR
EKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWE
IDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVK
FDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKE
GHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG
KKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNS
YKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLG
PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNI
MMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLI
FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL
GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK
MMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRIAMPDAVTPFS
DTLSTKGGAATPGMKKKHGSTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQN
MNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLG
KGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQL
KTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKYSTPDLLLEGPESKRSSEVVSSEPNTPVPASPAHTHAGPGALADKTEAQLGFHEEKD
PVEQKPRKVSESQVPASAEVESEEHPESCDGKERPRKEKQEDCEKAEPSSEPLGKGLFPP
ADEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEKEPSDAQQNGDKEEEEEGRKDD
RNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWHRRHDYWLLAGIVTHGYARW
QDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQ
DPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVT
RLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQASFGSAPIFNNSFGPNFRGPGPG
GIVNYSQMPLGPYVTDI
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
gacgacgcggacaacgaggaggatgtgtcggaagaagatgatggggtgctggaaggattg
gatgagttttttgcagaagaccaagttgtggtacagaaaaagaagaaatccaagaagctg
aaagatggcaaggctgccaaaatcaagaggaggaagaaggaggggagcaatgatgaaatg
tcagaaaatgaagaggagatggaggagaaatcggaaagcgaagggagtgactattctccc
aacaaaaagaagaagaaaaaactgaaagacaagaaggagaaaaagccaaaacggaagaag
aaggatgaagaggaggatgacaatgaggatggaagtttaaaggagcccaagagctcagcc
cagctcatggaggaatggggtctcgatgacgtagattacgttttctcagaagaggattac
catactctgacgaattacaaggctttcagccagttcctcaggcctctgattgccaagaag
aaccccaagatccccatgtccaagatgatgacggtgctcggtgccaagtggcgagagttc
agtgccaacaaccccttcaagggcagctcggcagccgccgctgcggcagctgtggctgca
gctgtggagactgtcaccatctccccagccctccctgccagcccccagccctctgccctg
cccactgtcgtcaggaaggccaagaccaaggagggcaagggtccaggtgtacggaagaaa
atcaagggctccaaagacgggaagaaaaaagggaaagggaaaaagatggcaggcttgaaa
tttcggtttggaggaatctccagcaaaaggaaaaagggctcctctagcgaagaggaggaa
cgggaagaatctgactttgacagcgccagcatcaacagctcctccgtgcgctcagagtgc
tcggctggcctggggaagagagggaagaagaggaaaaagaaaaagaggattgaagagggg
gacgggtacgagaccgaccaccaggactactgtgaggtgtgccagcagggcggggagatc
atcctgtgtgacacctgcccccgcgcctaccacctggtctgcctggaccccgagctggag
aaggcccccgagggcaagtggagctgcccccactgtgagaaggagggcatccaatgggag
ccgaaggaggaggaggaggaggaagaggatggtggtgaagaggaggaggaggatgaccac
atggagttctgccgggtgtgtaaggacggaggggagctgctgtgctgtgacacctgcccg
tcctcctaccaccttcactgcctgaacccgccgctgccagagatcccaaacggtgaatgg
ctctgcccacgctgtacagtgatgccctnnnnnnnnnnnnnnnnnnnnccgccgcccgcc
ccgccgccgcccgccgccgacccgcagccggctctgcccccgcccaaggcgctcgagggg
atcccggagcgagagttctttgtgaaatgggcaggcctctcctactggcactgctcctgg
gtcaaggagctgcagctggagctgtaccacaccgtgatgtaccgcaactaccagcgcaag
aacgacatggatgagccaccagcctttgactatggctctggggacgaggacagccagagg
gagaagaggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgctat
ggcatcaaacctgagtggatgatgatccaccgcatcctgaaccacagctttgacaaaaag
ggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgggag
atagatgacatagacatcccctactatgagaacctcaaactcctctactggaaccacagg
gagctgatgctgggggaggacacccgccctctgaagaagctgaacaagaaagggaaaaag
ctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacagtgaag
tttgacaagcagccgtggtacattgatgccacgggaggcacgctgcacccttaccagctg
gaagggctgaactggctgagattctcctgggcacaagggacagatacaatcctggctgat
gagatggggctagggaagacagtgcagaccattgtattcttgtattccctgtacaaggag
ggccattccaaagggccatacctggtcagtgcccccctctccaccatcatcaactgggag
cgtgagtttgagatgtgggcacctgacttctacgtggtgacctacacgggggacaaggag
agccgctcggtcatccgggaaaatgagttttcttttgaggacaacgccatccgcagcggg
aagaaggtcttcaggatgaagaaggaagcccagatcaagtttcatgtcctgctcacgtcc
tatgagctgatcaccattgaccaggcagtgctgggctccatagaatgggcctgtttggtg
gtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtgctgaatagc
tacaagatcgattacaagctgctcctcacagggactccgctccagaacaacttggaagag
ctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttcctg
gaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctgggt
ccccacatgctgcggcggctcaaggccgatgtgttcaagaacatgccggccaagacggag
ctgatcgtgcgcgtggagctgagccagatgcagaagaagtactacaaattcatactgaca
aggaactttgaagccctgaattcgaaaggtggtgggaatcaggtctcactgctcaacatc
atgatggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtggag
gcccctgtgctgcctaatggatcttatgatgggaattctttggtcaaatcttctgggaaa
ctgatgctgctccaaaagatgctgaagaagttgcgggatggcggtcacagagttctgatc
ttctcgcagatgacaaagatgctggatttgctggaggatttcctggagtatgaaggctac
aagtacgagcgcattgacgggggcatcaccggcggcctgcgccaggaggccatcgacagg
ttcaatgctcctggggctcagcagttctgctttctcctctccacccgtgctggtggtctg
ggcataaaccttgctacggccgacactgtcattatatatgattctgactggaatccccac
aatgacattcaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatt
taccgcttcgtgaccagggcctccgtggaggagcgcatcacccaggtggccaagaggaag
atgatgctcacccacctggtggtccgcccggggctcggctccaagtcgggctccatgacc
aaacaagagctggatgacatcctcaagtttgggacagaagaactcttcaaggatgatgta
gaaggcatggtgtctcagggacagaggattgcaatgcccgatgccgttacccctttctca
gacacactgtcgacaaaaggaggtgcagcaacccctggcatgaaaaaaaagcatggtagc
accccaccaggtgacaataaggatgtagatgacagcagtgtgatccactacgatgatgct
gccatctctaagcttttggaccgcaaccaggatgcgactgacgacacagagctgcagaac
atgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggacggt
gtggaggaggtggaacgggagatcatcaagcaagaggagaatgtggaccctgactactgg
gagaagctgctgcggcaccattatgagcagcagcaggaggatctggccaggaacctgggg
aaagggaagagaatccgcaagcaggtcaactacaatgacacctctcaggaggaccaagag
tggcaggacgagctctctgacaaccagtcagagtattccattggctctgaggatgaggat
gaagactttgaagaaaggccagaaggccagagtggcagaagacaatcacggagacagctg
aagactgacagagacaaacctctccctcctttgctggcaagagttggggggaacatcgag
gttctgggcttcaacgcccggcagcgcaaggcattcctgaatgccatcatgcgctgggga
atgccaccccaggatgccttcaactcccactggctggtccgggatctgcgagggaagagc
gagaaggagttcagggcatatgtgtccctgttcatgagacacttgtgtgagcctggggct
gatggtgctgagacctttgcggacggcgttccccgggaagggctgtcccgccagcacgtg
ctgactcgcatcggggtcatgtcactagtaaggaagaaggtccaggagttcgagcatgtc
aatgggaagtacagcaccccagacctgcttcttgagggtccagagagcaagagatccagt
gaggttgtgtcttcagagcccaacactcctgtcccggccagtccagcacacacacatgca
ggaccaggggcccttgcagacaaaacagaagcacagctggggttccatgaggaaaaggac
ccagtggaacagaagcccagaaaggtgtctgagagccaggtacctgcaagtgccgaggtg
gagagcgaagagcatccggaaagctgcgatggcaaggagaggccaaggaaagagaagcaa
gaggattgtgaaaaggctgagccttcttctgagcccctggggaaaggcctgttccctcct
gcagacgaggggattcaagagcaagagaagcctttggagaaggcagagttgagcagcagc
ccagggaagggggaggataaagaagtcaagccagaagatggcaaggaggaggagaaggaa
ccaagtgatgcccagcaaaatggtgacaaagaggaagaggaggagggaaggaaggatgac
agaaacatgaacttcagattcatgttcaacattgcagatggtggcttcacagagctgcac
acgctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgacatctgg
caccgccgacacgactactggctgttggcaggaattgtcactcatggctatgcccgctgg
caggacatccagaatgacccacgctatgtgatcctgaacgagcccttcaagtcagagata
cacaaggggaactaccttgagatgaagaacaagttccttgcccggcgttttaagttgctg
gagcaggccctggtgatcgaggagcagctgaggagggcagcgtacctcaacatgacccaa
gaccccagtcacccggccatggcactgaatgcgcggctggcagaagtggagtgccttgct
gagagccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgctgtc
ctgcacaaggtgctgaaccagcttgaggagctgctgagtgacatgaaggctgatgtgaca
cgcttgccctccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtcagag
cggagcatcctcagccgcctggccacccgtggaggggatccagctgcccaggcctccttt
ggctctgctccgatcttcaacaacagctttgggccaaatttccgtggtcctgggccaggt
gggattgtcaactacagccagatgcctctgggaccctatgtgactgatatttag
DBGET
integrated database retrieval system
