Serinus canaria (common canary): 103821859
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Entry
103821859 CDS
T05755
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03013
Nucleocytoplasmic transport
scan03015
mRNA surveillance pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103821859 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
103821859 (NCBP1)
03015 mRNA surveillance pathway
103821859 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103821859 (NCBP1)
03041 Spliceosome [BR:
scan03041
]
103821859 (NCBP1)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103821859 (NCBP1)
Spliceosome [BR:
scan03041
]
Common components
Common spliceosomal components
Cap binding complex
103821859 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
103821859
NCBI-ProteinID:
XP_030092951
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MIRQLKECLKVNMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCD
WYMFAFLSSLPWVGKELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEE
YLDCLWSQIQKLKKDRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRV
IFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPL
NYHIVEVIFAELFQLPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNT
TCVDRFINWFSHHLSNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIID
IVPASFSVLSPANPVCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNP
NQDDDDGEGFTFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVL
RVVYEVWKNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRK
MNKHVLKIHKELEETKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESA
QSEQKNLFLVIFQRFIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYM
VTLENLLFTAELDHHILAVFQQFCALQA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcagcttaaagaatgtctgaaagtgaacatgtataatgaagctgtgcattta
gtacgttttctgtccgatctcgtgaattgccacgtaatagctgcaccttcaatggtagct
atgtttgagaactttgtgagtgtaacacaggaggaggacgtaccccaagtgcgatgtgac
tggtatatgtttgcatttctgtcatctttgccttgggttggaaaggagttatatgagaag
aaggatgctgaaatggatcgtctcttgtctcaggcagaaagctatctgaaacgtcgccag
aagattcatgtacccatgttgcaagtgtggactgctgacaaaccacatccacaagaagag
tatttagactgcctttggtctcagattcagaaactgaaaaaagaccgttggcaagagcgg
cacatcctgaggccctacttggcttttgacagtgttctctgtgaggcactgcaacacaat
ctgcctcccttcacgcccccacctcacactgaagattccgtatacccaatgccaagggtt
atttttaggatgtttgactacacggatgaccctgagggtcctgtcatgcctggcagccac
tcagttgaaagatttgtgatagaggagaacctccactgcatcatcaaatctcactggaaa
gagagaaagacttgtgctgcacagctgttgagctatccgggaaataacaagatccctttg
aactaccatatagtagaggtaatatttgcagagttgtttcagctgccatctccaccacat
attgaagtcatgtacacaacgctgctgattgagctgtgcaaacttcagcctggctcctta
ccacaagttcttgcacaagccacagaaatgctctacatgcgtttggacacaatgaataca
acatgtgtggacagatttattaactggttttcccaccacttgagcaactttcagttccgt
tggagctgggaagactggtcagattgtcttactcaggaccttgaaaaacccaagcccaaa
tttgtgagagaggttttagaaaaatgcatgcgactctcctaccatcagcgaataatagac
attgttcctgcaagtttttctgtcctcagtcctgctaatccagtgtgcatttacaaatac
ggagatgagagcaataggtctcttcctggatatactgtggcactctgtttaacaattgca
attaaaaataaggccagcaatgatgaaatcttcagcattttaaaagatgtacctaatcca
aaccaggatgatgatgatggtgaaggatttactttcaaccctctgaaaatagaagtcttt
gttcagactctgctccatctagctgcaaagtctttcagccactccttcagtgccctggca
aagtttcatgaagtcttcaaaacacttgctgaaagtgatgaggggaagcttcatgttctg
agagttgtatatgaggtttggaagaatcatccacagatgattgctgtgcttgtggacaag
atgattcggacgcaaattgttgactgtgctgcagtagcaaactggatcttttcttcagag
ctggcacatgattttaccaggttttatatctgggagatcttacattccacaatccgtaag
atgaataagcatgtcctgaagattcacaaagaactggaggagaccaaagcaagattggcc
aggcagcacaaaagacgagacagtgatgatgatgatgatgatgatgaccgaagcaccgat
cgggaagatggaccactagaagagcagatagagcgcttgcaggaaaaagtagagtcagcc
cagagtgagcagaagaatctttttcttgttatattccagcgtttcattatgttgttaacg
gagcacttagtgcgctgcgagactggtggaattgatgtatttacaccttggtacaagagc
tgtatagagaggttgcagcagatcttcctgcagcaccaccagataatccagcagtacatg
gtgacgctagagaacctcctgtttacagctgaactggaccaccacattctggctgtgttt
cagcagttctgtgctctgcaggcctga
DBGET
integrated database retrieval system
