Serinus canaria (common canary): 103821970
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Entry
103821970 CDS
T05755
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103821970 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
103821970 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103821970 (LSM7)
03041 Spliceosome [BR:
scan03041
]
103821970 (LSM7)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103821970 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
103821970 (LSM7)
Spliceosome [BR:
scan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103821970 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
103821970
NCBI-ProteinID:
XP_030087257
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MASGGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLV
LDGTIEYMRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggtggtggcggcggtggcggcgcagggaagatggcggataaggagaagaag
aagaaagagagcatcttggacctctccaagtacatcgacaagaccatccgggtgaagttc
cagggcgggcgggaagcaagcggtgtcttgaaaggatttgaccctcttctgaaccttgtg
ctggatggtaccattgagtatatgcgtgatccggatgatcaatttaaattaacagaagac
acacgtcagctgggacttgtggtttgcagagggacttctgtggttcttatttgtccacag
gatggaatggaagctattccaaacccttttattcagcagcaggatggctaa
DBGET
integrated database retrieval system
