Serinus canaria (common canary): 103822190
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Entry
103822190 CDS
T05755
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103822190 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103822190 (CDC40)
Spliceosome [BR:
scan03041
]
Complex C
Other components
Step II factors
103822190 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
103822190
NCBI-ProteinID:
XP_030091615
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MSAAIAALASYGGSDSDPDSEPETEGGSQCSAAVLASRDAVLHLRCWGQPWSSPRLRKRG
RKGAVPVGEDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYA
EPAHINDFMFEQQRRTFATYGYALDPSVDNPEAATKYIGSVEEAEKNQGLTVFETGQRKI
EKRKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPG
EEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVR
LFPLSGHIMLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRY
LKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYD
RHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKW
LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIW
DWKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggctatcgccgcgctcgcctcctacggtggctccgactcggaccccgactcg
gagcccgagaccgagggcggctcccagtgctctgccgccgtgctcgccagccgagatgcc
gtgctgcacctccggtgctgggggcagccctggagcagccccaggctgaggaagcggggc
agaaagggcgcggtgccggtaggggaagatgtggaaacaggagtccaccttgatcctgct
atcaaggaagttcagtacaatcccacttatgaaaccatgtttgcacctgagtttggacca
gaaaacccatttaggactcagcaaatggctgcacctagaaacatgctttctggatatgct
gaaccagctcacatcaatgatttcatgtttgaacaacaaagaagaacatttgcaacctat
ggttatgcattagatccttctgtagataaccctgaagctgctaccaaatatattggttct
gtagaagaagctgaaaaaaatcaaggtttaacagtgtttgaaacaggacagaggaaaatt
gaaaagaggaagaaattcaaggagaatgatgcatctaatattgatggttttctgggacca
tgggcaaagtatgttgatgaaaaagaagtagccaaaccatcagaggaagagcagaaggag
ttggatgaaataacagctaagaggcagaagagaggaaaactagaagatgataaacctgga
gaggagaagactatattacatgttaaagaaatgtatgactatcaggggagatcttatctt
catgtccctcaagatgttggggttaatctccgctctacagtaccacctgagaagtgctat
cttccaaagaaacaaatccatgtgtggtctgggcatacaaagggtgtcagtgcagtcaga
ttatttcctttgtctgggcatataatgttgtcttgctctatggattgcaaaattaagcta
tgggaagtatatggtgatcgaagatgtctgcgaacatttattggacacagtaaagctgtt
cgagacatctgttttaacaatgcaggcactcagttccttagtgctgcatatgaccgctat
ctcaaactctgggacactgaaacagggcaatgtatttcaagattcaccaacaggaaggtt
ccttattgtgtcaagttcaatcctgatgaagataaacagaatctctttgttgcagggatg
tcagataagaaaattgtacagtgggatattcgaagtggtgagattgtgcaggaatacgat
aggcatttgggagctgtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagt
acatctgatgacaagagtttaagagtctgggaatgggacattcctgtagacttcaagtac
atagctgagccaagtatgcattccatgccagccgtgactctgtctccaaatgggaaatgg
ttggcttgccagtcaatggataaccaaatcttgatttttggagctcagaacagattcaga
ttaaacaaaaagaaaattttcaaaggtcacatggtagctggctacgcttgtcaagtggat
ttttcacctgatatgagctatgtgatatctggagatgcagatgggaaactgaacatctgg
gactggaagacaacaaaactctacagcaggttaaaagcacatgacaaagtctgtatcggt
gcagtgtggcatccacacgaaacatccaaagtcatcacgtgcggctgggatggtctgatt
aaactctgggactag
DBGET
integrated database retrieval system
