Serinus canaria (common canary): 103822935
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Entry
103822935 CDS
T05755
Symbol
VCP
Name
(RefSeq) LOW QUALITY PROTEIN: transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
scan
Serinus canaria (common canary)
Pathway
scan04137
Mitophagy - animal
scan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103822935 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103822935 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103822935 (VCP)
03009 Ribosome biogenesis [BR:
scan03009
]
103822935 (VCP)
04131 Membrane trafficking [BR:
scan04131
]
103822935 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103822935 (VCP)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103822935 (VCP)
Ribosome biogenesis [BR:
scan03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103822935 (VCP)
Membrane trafficking [BR:
scan04131
]
SNARE
SNARE associated proteins
Others
103822935 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103822935 (VCP)
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103822935 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_22
TIP49
AAA_33
AAA_14
Vps4_C
NPHP3_N
Mg_chelatase
RNA_helicase
nSTAND3
Parvo_NS1
ATPase
AAA_7
IstB_IS21
ATPase_2
AAA_28
ABC_tran
DUF815
AAA_18
ResIII
AAA_24
AAA_17
NACHT
NB-ARC
TsaE
Viral_helicase1
KAP_NTPase
DUF3944
Motif
Other DBs
NCBI-GeneID:
103822935
NCBI-ProteinID:
XP_030092848
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAXXXXXXTGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKVNGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR
RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEA
ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED
IGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAAD
RVINQILTEMDGMSTKKXVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILK
ANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPS
AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQ
GGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgactctaaagccgatgacttatcgactgctattctgaagcagaag
aacaggcccaatcggttaattgttgacgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaagatggatgaactgcagctgttcagaggagacactgtcctgctcaaa
ggaaagaagaggagagaagcagtgtgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgcaacaacctgagagtgcgcctgggtgatgtcatc
agcatccagccttgcccagacgtgaaatatggcaaacgtatccacgtgctgccaattgat
gacacagtagaagggatcacagggaatctatttgaggtctatctcaagccctacttcttg
gaagcttacagacctattaggaaaggtgacatcttcttggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagatccaagcccgtactgcatagtggctccggacaca
gtgatccattgtgagggagagcccatcaaacgggaggatgaagaggagtcgctgaatgag
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaggagatggtg
gagcttcccctccgacaccctgctctcttcaaggccataggggtgaagcctccacgtggg
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcgnnnnnnnnn
nnnnnnnnnacaggggctttcttcttcctgatcaatggtcctgagatcatgagcaagctg
gctggtgagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcct
gccatcatcttcattgatgaattggatgccattgctcctaagagagagaaggtaaacggg
gaggtggaacgtcgcatcgtgtctcagctgctgaccctcatggatgggctgaagcagagg
gcacatgtgattgtgatggcagccaccaacagacccaacagcatcgacccagcgctccgg
cgattcggtcgttttgacagggaggtagatattggtatccctgatgccaccgggcgccta
gagatcctgcagatccacacaaaaaacatgaaactggctgatgatgtggatctggagcag
gtggcaaacgagacccatggccatgttggtgctgacttggctgctctttgctcagaagct
gctcttcaggcaatcagaaagaagatggatctcatagacctagaagatgaaaccatcgat
gctgaagtgatgaactctctggcagtgacaatggatgacttcaggtgggctctgagccag
agcaacccttctgctcttcgggagactgtggtggaggtgccacaagttacctgggaagat
attggtggcctagaagatgtaaagagggaactccaggagcttgtacagtaccctgtggag
cacccagacaagttcctcaaatttggcatgaccccatccaaaggggttctgttctatggg
ccacctggctgtggtaagacactgctggccaaagccattgccaacgaatgccaggcaaac
ttcatttccatcaaggggccggaattgctcaccatgtggtttggtgagtctgaagccaac
gtgcgtgagatctttgacaaggctcgccaagcagccccctgtgtgctcttctttgatgag
ctggactccatcgccaaggcccgaggcggtaatatcggtgatggcggtggtgctgcagat
cgtgtcatcaaccagatcctgaccgagatggacggcatgtccaccaagaaanaagtcttc
atcatcggtgccaccaacaggccagacatcattgacccagccatcctgcgccccggccgc
ctggatcagctcatctacatccccctgcctgacgagaagtccagggttgcaatccttaaa
gccaatctgaggaaatcaccagttgcaaaggatgttgacctggatttcctggcgaagatg
accaacggcttctcaggggctgacctgacagaaatttgccagcgtgcctgcaaactggcc
atccgcgaatccatcgagagtgagatcaggcgagagcgtgagaggcaaaccaacccttct
gccatggaggtggaggaggacgatccagttcccgagatccgcagggatcactttgaggag
gccatgcgctttgctcgccgctctgtcagtgacaacgacatcaggaaatatgagatgttt
gcacagaccctacagcagagccgtggctttggcagcttcaggttcccatcaggcaaccag
ggcggcgctggtccgagccaaggcacaggaggtggcagcgggggcaacgtgtacagcgaa
gacaatgacgatgatctctacggttaa
DBGET
integrated database retrieval system
