Serinus canaria (common canary): 103822966 Help Entry 103822966         CDS       T05755                                  Symbol PTCH1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism scan  Serinus canaria (common canary) Pathway scan04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:scan00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     103822966 (PTCH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing Patched Motif Other DBs NCBI-GeneID:  103822966 NCBI-ProteinID:  XP_030092706 LinkDB All DBs Position Unknown AA seq 1401 aa AA seqDB search MRAPPRPPARLSRAAPARAAMGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGL LIFGAFAVGLRAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDG ANVLTTEALRQHLESALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPC LIITPLDCFWEGAKLQSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAE VGHGYMDRPCLNPADPDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGT VKNSSGKLVSAQALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEV VHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSAIRVASGYLLMLAYACLTMLRWDCAKSQ GAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETG QNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFA MVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVTRVIQVEPQAYAENDNTCYSPPPPYSS HSFAHETQITMQSTVQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSS TRDLLSQFSDSSIHCLEQPCTKWTLSSFAEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYG TTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQQLLYELHRSFS NVAYVLLEEDRQLPKMWLHYFRDWLQGLQDAFDSDWETGKITYNSYKNGSDDAVLAYKLL VQTGNHAKPIDISQLTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPE WVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYTSLGIS SYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVEL FGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRNHRAVLALEHMFAPVL DGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPA NGQDRLPTPSPEPPPSTVRFALPPGHTNNASDSSDSEYSSQTTVSGISEELHQYEATRGP GAPVHQVIVEATENPLFARSTVVQPEARHQPSPRLQPNPEPSAQQPWHQGRQPKREAREG PRPPPYRPRRDAFEISTEGHSGPSSSSSSSRDRSGHKARCHSVRSPAFGAAGAAGAAYCQ PITTVTASASVTVAVHPALHSHSPRGVSFPSYEGHHEAGHAPFEDPHVPFNVRCERRNSK VEVIELQDVECEERIPGNSSQ NT seq 4206 nt NT seq  +upstreamnt  +downstreamnt atgagggcgccacccagacctccagcacggctcagccgagcggctcctgcaagggcagcg atggggaaggcgacgggacggaaagcaccgctgtggctgcgagcaaagtttcagagactg ttgtttaaactgggctgttacattcagaaaaactgcgggaagtttttggttgtcggcctc ctgatatttggggctttcgctgtaggattaagggcagctaatctcgagaccaacgtggag gagctgtgggtggaagttggtggacgagtgagtcgggagttaaattacacacggcagaag attggagaagaggccatgttcaacccccagctcatgatccagactccacaggaagatggt gctaatgtactaacaacagaagcactgcgacagcaccttgagtctgcgcttcaggccagc agagtacatgtctatatgtacaacagacagtggaaattggaacatttgtgttacaaatca ggagaactcatcacagaagcaggttacatggaccagatcatagaatatctttatccttgc ttaattatcactcctttggactgcttctgggaaggagcaaagctacagtcaggaactgcc tatctattagggaagcctcctttgcagtggatcaactttgaccccttagaattcttggaa gagttaaagaaaataaactaccaagtggagagctgggaagaaatgctgaataaagcggag gttggtcatggttatatggatcgaccctgcctgaatcctgctgatcccgattgcccaatc acagctcccaataaaaattccaccaaacctcttgatgtagcccttgttttgagtggtgga tgctatggactatcaagaaagtacatgcattggcaggaggagctgattataggtggtaca gtcaagaacagttctggtaaacttgtcagtgcccaggctttgcaaaccatgtttcagtta atgacccctaaacaaatgtatgagcatttcaaggggtatgaatatgtttcacacatcaac tggaacgaggacaaggcagcagcaattctggaagcctggcagaggatgtatgttgaggtt gttcatcaaagtgttgcacaaaactctactcagaaggtgctttccttcactacgaccacc ctggatgacatcttgaagtcattttctgatgtcagtgctatccgagtagctagtggctac ttactaatgcttgcctatgcctgtttaacgatgctgcggtgggactgtgccaagtctcag ggtgctgtggggctggcaggagtcttgttggttgcactctctgtggctgcaggattgggc ctgtgctcgttgattggaatttcctttaatgctgccacaactcaggttttgccttttctt gctctcggagttggtgtagatgatgttttccttctggcacatgcatttagtgaaacagga cagaataagagaattccttttgaggacagaacaggtgaatgtctgaagcgaacaggagca agtgtagcccttacatctatcagcaatgttactgctttctttatggccgccctaattcca attccggctttaagagcgttttcactgcaagcagcagttgtggtggtgttcaattttgcc atggttctgctgattttccctgctatcctgagcatggacctttatcgtcgggaagacagg agactggacatattttgctgttttacaagcccgtgtgtcactagagtgattcaggttgag cctcaagcatacgcagaaaatgacaatacttgctacagtcctccacccccgtacagcagc cacagttttgcacatgaaactcagattacaatgcagtccacggtgcagctgcgcacagaa tacgatcctcacacgcaggtgtactacaccacagcagagcctcgctcagaaatatctgtg cagccagtgacagtgacacaagataacctcagctgccagagcccagaaagcacaagctcg acgagggatttgctttcccaattctcagactccagtatacattgccttgagcagccctgt acaaagtggacgctctcatcttttgcagaaaagcattatgctccattcctcctaaaacca aaagctaagattgtggttatttttctttttctgggtttacttgggctcagcctttatgga actacccgggtaagagatggactagatctcacagacattgtaccacgggaaacacgggaa tatgactttattgctgcacagttcaagtacttttcattctacaacatgtacattgtgaca cagaaagcagactatccaaacgtccagcagttactttatgaacttcacagaagtttcagc aacgtggcctatgttctgttggaagaggataggcagctccccaaaatgtggttgcactac tttcgagactggctgcaaggacttcaagatgcatttgacagtgactgggaaactgggaag atcacttacaacagctacaaaaacggttctgacgatgctgttttggcttacaaactcttg gtacaaacaggcaaccatgcgaagcccattgatatcagccagttgactaaacagcgtctg gtggatgcggatggaatcattaacccaaatgctttctacatctacctgacagcctgggtt agcaacgaccctgtggcgtatgctgcctcgcaggccaacatccgcccgcaccgccccgag tgggtccatgacaaagcagactacatgccagaaacacggctgaggattccagcagccgag cccatagaatatgctcagtttcctttctacctcaatggattgcgtgaaacttctgacttt gtggaggctatcgagaaagtgagagctatctgtaataactacaccagcttggggatctcc agctaccctaatgggtacccatttctcttctgggagcagtacattggacttcgtcactgg ctcctcttatccattagtgtggttttggcttgcacgtttctggtgtgtgccctcttcctc ctaaacccctggacagctgggatcattgtggtggtgctggctctgatgactgtggagctg ttcggcatgatgggtctaattggaataaagttgagtgcagtgcctgtggttatcctgatt gcttctgttggcattggtgtggaattcactgttcatgttgctttggcgtttttaactgcc ataggagacaggaaccatagggctgtccttgcgttggaacacatgtttgcaccagtgcta gatggggccgtgtccactctgcttggggtgttaatgcttgcaggatcagagtttgatttt attgtcaggtatttctttgctgttctggcaatcctaaccattctgggagttctcaatgga ttggtgctgcttcctgttcttctctcattctttggaccataccctgaggtttctccagcc aacggacaggacagattgcccacaccatctcctgagccaccccccagtactgtgaggttt gcactgccacctggccacacaaataatgcttcagattcctctgattctgagtacagctct caaaccacagtgtctggcatcagtgaagagctgcatcagtatgaggccacacgaggtcct ggggcaccagtccatcaagtaatagtggaagcgactgagaatcctctctttgcaagatcc actgtggttcagccggaggcaaggcaccagccgagccctcggctgcagccgaatccagag cccagcgcgcagcagccgtggcatcagggcagacagcccaaaagggaagcgagggaaggg ccgcgaccacctccttaccgccctcgcagggacgcttttgaaatttctaccgaagggcac tcgggacccagcagcagcagcagcagcagcagggatcgctcgggccacaaggctcgctgc cacagcgtgaggagcccggcgttcggggccgcgggcgccgcaggagcagcctactgccag cccatcactactgtgactgcctcggcctcagtcactgttgctgtccaccctgccctgcac agccacagccctcggggagtgagcttcccgtcctacgagggacaccacgaagccggccat gcgccgtttgaggacccccacgtgccttttaatgtgcggtgtgaaagaagaaattctaaa gtggaagttatagagctgcaagatgtggaatgtgaggagaggatacctggcaacagctca caataa

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