Serinus canaria (common canary): 103823181
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Entry
103823181 CDS
T05755
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103823181 (LINGO1)
Membrane trafficking [BR:
scan04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
103823181 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
103823181
NCBI-ProteinID:
XP_009096476
UniProt:
A0A8C9NG16
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MPPAWREVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVL
CHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAVEPGAFN
NLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGD
NDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFK
RLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSY
NPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFH
SVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLP
NYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTV
FPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQP
NESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIE
YVPRKSDAGISSADAPRKFNMKMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcctggagagaggtgagagataggatggtagctggggaggcgagtatgcgc
agcccaatcctggcctgctggcagccgattctcctcctgatgctgggatccatcctgtcc
ggctccgccacgggctgcccgccgcgctgcgagtgctctgcccaggagcgcgccgtcctg
tgccaccgcaagcgattcatggtcgtgccagaggggatccccaccgagaccaggctgctg
gacttgggcaagaaccgcatcaagacgctcaaccaggatgaatttgccaactaccctcac
ttggaggagctggagctaaacgagaacattatcagtgccgttgaacctggggctttcaac
aacctcttcaacctcaggacgctggggctcaggagtaacagactcaagctgatccctttg
ggggtgtttactggactcagcaaccttaccaagctagacattagtgagaataaaattgtg
atcctcctagattacatgttccaggacttgtacaacctgaagtctttggaggtgggtgac
aacgaccttgtctacatctcccaccgggccttcagtggcctcaacagcctggagcagctg
accctggagaaatgcaacctgacttccatccccacggaggccctgtctcaccttcacggc
ttgatcgtgctgcggctgcgccatctgaacatcaacaccatccgggattactcattcaag
aggctgtaccggctcaaggtcctcgagatctcacactggccctacctggatactatgaca
tccaactgcctctatgggttgaacctgacctccttgtccatcacccactgcaacctgacg
tccatcccgtacgtgtcggtgaggcacttggtttacctccggttcctgaacctgtcctac
aaccccatcgtcaccatcgagggctcaatgctccatgacctgctcaggctccaggagatc
cagctggtgggagggcagctcaccacggtcgagcccttcgcctttcgcggcctcaattac
ctgcgcatcctgaacgtgtcagggaacctgctgaccaccctggaggagtcagctttccac
tccgtgggcaacctggagacgctcatcctcgacaacaaccccttagcctgcgactgtcgg
ctgctctgggttttccggcggcgatggaggttgaacttcaacaagcagcagcccacctgc
tccacccctgagttcgtccagggcaaggagttcaaggacttccctgacgtcctcctgccc
aactacttcacctgccgccgagcacggatacgggaccgcaaacctcagcagatcttcgtg
gacgaaggccacacggtgcattttgtctgccgggcagatggggacccgccgcccaccatc
atgtggctgtctccccgcaagcacctcatctctaccaaaaccaatgggcggctcactgtc
ttccctgacggcacgctggaggtgcgctacgcccagatccaggacaatggcacctaccta
tgcatcgccagcaacgcgggtggcaacgacaccatgctggcccacctgcacgtgcgcagc
tactcgccagactggccccaccagcccaacaagaccttcgcgttcatctccaaccagccc
aacgagagcgatgccaacagcacgcgcgccaccgtgcctttcccctttgacatcaagact
ctcatcatcgccaccaccatgggcttcatctccttcctgggcgtcgtgctcttctgtctg
gtgctcctcttcctctggagccgtgggaaaggcaacaccaagcacaatattgaaatcgag
tacgtgccacggaagtccgacgcgggcatcagctctgccgacgcgccgcgcaagtttaat
atgaaaatgatttaa
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