Serinus canaria (common canary): 103823257
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Entry
103823257 CDS
T05755
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103823257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103823257
03009 Ribosome biogenesis [BR:
scan03009
]
103823257
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103823257
Ribosome biogenesis [BR:
scan03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103823257
Pre-60S particles
103823257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
HEAT_EF3_N
Cnd1
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
PDS5
MMS19_C
CEP104-like_TOG
HEAT_MROH2B_1st
HEAT_GCN1_C
INTS7_N
HEAT_GCN1_C_2
Dopey_N
UNC45-central
ARM_TBCD
RTP1_C1
TPR_TTI1_C
VPS15-like_hel
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
103823257
NCBI-ProteinID:
XP_030093344
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MADWFPTPPCFVLFERDALLRRTQEDARRLLEPDCKFAVTQSVYWSSVSLQKLEQLNQYP
DFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKNECLNNIGDSSP
LIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILD
SDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALA
GDEEPEVRKNVCRALVMLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLA
EQPICKDVLCRHLAKLIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRT
VAQPHEEDRIEDDDDDDDDNDLDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLL
KELLFHPEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSNKKALVRSITCWTL
SRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYI
LDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKD
LFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMI
VALDLLSGLAEGLGGNIEQLVACSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHV
KPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQHYIPMVLHQLVEIINRPN
TPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMIS
VNPSGVVQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKE
RLAAYYGV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgactggttccccaccccaccatgctttgttctatttgaaagggacgcccttctc
agaaggacccaggaggacgcaaggcggctcttagagccagattgcaaatttgccgtgact
cagtccgtgtactggagcagtgtttctcttcagaaactagaacaactcaatcagtatcca
gatttcaacaactacctgatttttgttcttacaaagctgaagtctgaagatgagccgacg
cgttccttgagtggtctcatcttaaagaataatgtaaaagcacattttcacaactttcca
aatggagtaactgacttcattaaaaatgaatgtttgaacaatattggtgattcctccccc
ttaattagagctactgtaggcattctgataacaaccattgcttcaaaaggggaattgcag
aattggcctgacctcttaccaaagctttgcagcctgttggactctgaagattataatacc
tgtgagggtgcatttggtgctcttcagaagatatgcgaagattctgctgaaattttagat
agtgatgtattggaccgaccactcaatatcatgatacctaaattcttgcagttcttcaaa
cacagcagtccaaaaataaggtctcatgctgttgcatgtgtcaatcaatttatcatcagc
agaactcaagctcttatgttgcacatagattcttttattgagaatctttttgcactggct
ggtgatgaggagcctgaagtacgcaaaaatgtttgtcgtgctctggtaatgttgctagaa
gttcgaatggatcgcctgcttcctcatatgattagtatagttgagtatatgcttcaaagg
acccaggaccaagatgaaaatgttgctttggaggcttgtgagttttggctgactttggct
gaacagccaatttgtaaagatgtattatgtcggcatcttgctaaactgatacctgtgctg
gtaaatggtatgaaatattcagagattgatattattctgttaaagggggatgttgaagaa
gatgaagctattccagatagtgaacaggacataagacctcgttttcatcgttcgcggaca
gtagctcagccacatgaagaagatcgtattgaagatgatgatgacgatgatgacgacaat
gatcttgatgatgacgatactatttctgactggaatttgaggaaatgttctgctgctgct
ctagatgtcctggctaatgtatttcgtgatgaacttctgccacacatcttgccccttttg
aaggaattgcttttccatcctgaatgggtagttaaagaatctggtattcttgttcttgga
gcaattgctgaaggttgcatgcagggtatgattccatatcttcctgaactgatccctcac
cttattcagtgcctctctaataaaaaggctcttgtgcgctccatcacttgctggactctt
agtcgctatgcacactgggtagttagtcaacccccagacacatacttgaagccattaatg
accgagttgctaaagcgcattctggatagcaacaagagagtacaagaagctgcttgcagt
gcctttgctactctagaagaggaggcttgtacagagcttgttccttatcttgcatatata
cttgacactttggtcttcgcatttagtaaatatcagcataaaaacctgctcattctttat
gatgctataggaactctagcagattctgtaggacatcatctaaataaacctgaatatatt
cagatgctgatgcctccattaatccagaagtggaacatgttgaaggatgaagacaaagat
ctcttccctttattggagtgcctgtcatcagttgctactgccttgcaatctggatttctt
ccatactgtgagcctgtgtaccagcgttgtgtcaatctggtgcagaagactcttgcacaa
gccatgttgcacaatgctcagccagaccaatatgaggctccagataaagatttcatgatt
gtagctcttgatttactcagtggtttagctgaaggacttggaggcaacattgaacagcta
gtggcttgcagcaatatcctgacactaatgtaccaatgtatgcaggataaaatgcctgag
gtgcggcagagttcttttgcattgttaggtgatctgacaaaggcgtgttttcagcatgtt
aagccttgcatcgctgatttcatgcccattttgggaacaaacctaaaccctgaattcatt
tctgtgtgtaacaatgccacctgggcgattggagaaatctccatccaaatgggtatagag
atgcagcattatattccaatggtgttgcaccagcttgtagaaataattaacagacccaac
acaccaaagacattgttagagaacacagcaataacaattggtcgtcttggttacgtttgt
cctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacttctctgcga
aacataagagacaatgaggaaaaggattcagcgttccgtgggatatgtaccatgatctca
gtcaaccccagtggagtagtccaagacttcatttttttttgtgatgctgttgcatcgtgg
attaacccaaaagatgatctccgagacatgttctgtaagattcttcatggatttaaaaat
caagttggggatgagaattggagacgtttttctgaccagtttcctcttcccttaaaagag
cgccttgcagcttactatggagtttaa
DBGET
integrated database retrieval system
