Serinus canaria (common canary): 103823322
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Entry
103823322 CDS
T05755
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103823322 (DDX20)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103823322 (DDX20)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
103823322 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_30
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
103823322
NCBI-ProteinID:
XP_030089394
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MAAPMEAAGRFRTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCG
LDLIVQAKSGTGKTCVFATVALDAVLLESPATQILILAPTREIAVQIHAVITTIGIKMEG
LECHVFIGGTPLSQDRSRLKKCHIAVGSPGRIKQLIELDYLSTASVRLLVLDEADKLLEE
GSFQEQVNWIYSSLPVNKQVLAVSATYPESLAAALTRYMREPTFVRLNPTDPALLGLKQY
YKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECI
SGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRIGR
AGRFGTLGLAVTYCCRGEEENTMMKIAQKCNLQLLPLPEPIPPGMMEQFEDGQVEVKPAI
PTGPVVNCDTVCPKPEQPVLQPVQNGFPDIPQPPSNLPRDNSSVERPKKTPKPKKIKKCT
NPANVEKNRTPQTSSCHTEQRNQVKSISRRDAQHSTQAPDEEALKKNLPKIPCLSSFKTQ
LTNPWSFSDFVEDYDYFIKEGSEREVEILRSYSGPGEQRGLPRNGDVEWEEMEHHPETAA
EEVSADSDGSESSRGSFISRANKGSVSSRGSFISRANDGSVSSRGSFNSRANNSCSEAFS
DTQEPSPVSPARRGPPGFCPTPEKPWEPSHGPRKKEVTKKVPKQNAKARKSHGHQFCSPA
TSRAEEEQSCSSWGDAAHEGWSSEHYWRCYYQAWQSYCSAVSHYSRSYWHLSCLSAYHTN
SVYLQELLRDGD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatggaggcggcgggcaggttccgtacccgggatgtgctgctgcccggc
ggcccctccgacttcggctctctcctgctgtcgccgccggtgctggcggggctggaggcg
gccggcttccatcggccctcgccggtgcagctgaaggccatcccgctggggcgctgcggg
ctggatctcatcgtgcaggccaagtctggcaccggcaagacctgcgtgttcgccaccgtc
gccctggacgccgtgctgctggagagccccgccacgcagatcctgatcctggctcccacg
agagagatcgctgtgcagatccacgccgtgatcacgaccattggcataaaaatggaaggc
ttggaatgccacgtgttcattgggggcactcctctgagccaggacagaagcaggctgaag
aagtgccacatcgctgtgggctccccagggcggatcaagcagctgatcgagctggactac
ctgagcacggccagcgtgcggctcctggtgctggacgaggcagacaagctgctggaggag
ggcagcttccaggagcaggtcaactggatctactcctccctgcccgtcaataagcaggtg
ctggcagtctcagccacctaccccgagtccttggctgctgctctcaccaggtacatgagg
gagcccacgtttgtcaggctgaaccccacggacccagcccttcttgggctgaagcagtac
tacaaaatcgtgaattcccatcccctcccacacaaaacctttgaggaaaaaacccagcac
ctgcaggagttgttcagcaagattcctttcaaccaagccttggtcttctcaaacttgcac
agcagggctcagcatctggctgaaatactgacatccaggggcttccctgctgagtgcatt
tcaggcaacatgaatcaaaatcagcgacttgatgccatggctaaattaaagcaattccac
tgcagagttctgatttccacagacttgacatctcgtggaattgatgctgagaaggtgaac
ctggtcatcaacctggacgtgcctctggactgggagacctacatgcaccgcatcggccgc
gccgggcgcttcggcaccttggggctggctgtgacctactgctgccgtggggaggaggag
aacaccatgatgaaaattgctcagaagtgcaacctgcagcttcttcctctgccagagcca
atcccccctggaatgatggagcagtttgaggatgggcaggtggaagttaaacctgcaata
cccacgggacctgtggtgaactgtgacactgtgtgtcctaaaccagagcagccagtgctg
cagcctgtccagaatggctttccagacatacctcagcctccctctaatcttccaagggat
aattcttctgtggaaaggccaaaaaagactccgaagccaaaaaagattaaaaagtgcaca
aatcctgcaaatgtagagaaaaatagaaccccccaaacttccagctgtcacacagaacag
aggaaccaagtcaaatccatctccaggagggatgcacagcacagcactcaggctccagat
gaggaggccttaaaaaaaaatcttcccaaaattccatgcttgtcttctttcaaaacccaa
ctcaccaatccctggagcttctcagattttgttgaagattatgattatttcattaaagaa
gggtctgagagagaggtggagattttaagaagttactcaggcccaggagagcagcgtggg
ctgcccagaaatggggacgtggagtgggaagagatggaacatcacccagagacagcagca
gaggaggtgtctgctgacagcgatggctcagagagctccaggggttcctttatcagcagg
gccaataaaggctcagtcagctccaggggttcctttatcagcagggccaatgatggctca
gtcagctccaggggttcctttaacagcagggccaacaactcctgctctgaggccttttca
gacacacaggagccaagccctgtgtccccagcacgccgggggcccccaggtttctgtccc
acaccggagaagccttgggagccatcccatggccccaggaagaaggaagtgacaaagaaa
gtcccaaaacaaaatgctaaagccaggaaaagccacgggcatcaattctgcagtcctgcc
acgagcagagctgaagaggagcagagctgcagctcctggggtgatgctgcccacgagggc
tggagctctgagcactactggagatgttactaccaggcctggcagagctactgctcagca
gtgtcccactacagcaggagctactggcacctgagctgcctcagtgcctaccacaccaac
tcagtctatctccaggagctgctgagagatggggactga
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