Serinus canaria (common canary): 103823411
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Entry
103823411 CDS
T05755
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103823411
03036 Chromosome and associated proteins [BR:
scan03036
]
103823411
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103823411
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103823411
SLIK complex
103823411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103823411
NCBI-ProteinID:
XP_030095358
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MSGSESVSGTSSDSESEEDKEKSSCEDSESDYEPENKVKSWKPPSRIEPKSGKKIAGQKK
RQLDSSDNDDYDKRGSRRQATVNVSYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEK
FMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEIQYLIKWKGWSHIHNTWETEE
TLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIA
HSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTRIDEYFSRNQSKTTPFKDCKI
LKQRPRFVALKKQPSYIGGHDSLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQT
ISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEW
MHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSN
HRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLR
RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK
KCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM
LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA
DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLV
IQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEIL
KRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELKPEQNLRNWEEIIPEVQRRRIE
EEERQKELEEIYMLPRMRNCAKQISFNGSEGKHSRRRRYSGSDSDSVSERKRPKKRGRPR
TIPRENIKGFNDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEIDLRRLGELVHNGC
IKALKDNSFGQERAGGRFGKVKGPTFRISGVQVNAKLVFSHEEELAPLHKSIPADPEERK
RYVIPCHTKAAHFDIDWSKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKK
PQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKARSKKNRATKTAKIKEEIKSD
SSPPSEKSDDDEYNEDEIVSVKCPHKKIKAEENEKKPEPDIGIKMEAVEKRETREKENKR
HLKREKKEDKKELKNIKEKRESKLKESTQKEKEVKEEKANELKSENKEKNKKVSLLDIPV
HITATSETVPISEESEELDQRTFGVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCL
IKIGDHITECLKEYTNPEQIKRWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQHSD
QNISNNMNTHVIRNPGVERLKENSNHDDSSRDSSDRHLSQYYDHHKDKHQEDAYNKNDSR
KRSCSAFSNGKDHRDWDHYKQDSRYYSDGKRRKLDDHRSRDQRSNLEGSLKDSRPHSNHR
SHSDHRIHSDHRSTSEYIHHKSSRDYRYHSDWQIDHRASGSGPRSPLDQRSPYGSRSPIG
HRSPFEHSSDHKSTPEHTWSSRKT
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtcagagtcagtatcaggaactagttctgattctgaatcagaggaagataaa
gagaaaagcagttgtgaagacagtgaatctgactatgagccagaaaacaaagtcaaaagc
tggaaacctccaagcagaattgagccaaaaagtggcaaaaagattgcaggacagaaaaag
aggcagcttgattcgtcagacaatgatgactatgacaagagaggatctcgtcgccaggca
acagtcaatgttagctacaaagaagctgaagaaaccaagacagattctgatgacttgttg
gaagtttgtggagaagatgtcccacagcctgaagaagatgaatttgaaactatagagaag
tttatggatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgca
gttgaggcagatggtgacccaaatactgggtttgaaaaatcaaaggagccaggagaaata
cagtatcttattaaatggaaaggctggtcacacatccataatacatgggaaactgaggaa
acactgaagcaacaaaatgttaaaggaatgaagaaactggacaactacaaaaaaaaggat
caggaaacaaaacgctggctgaaaaatgcatctccagaagatgtggaatattataactgc
cagcaggaacttacagatgatctacataaacagtatcaaatagtggagaggataattgct
cattcaaatcagaaatcagcagctggttatccagattactattgcaaatggcaaggtctg
ccttactcagaatgtagctgggaagacggtgctctcattgccaaaaaatttcagacacgt
attgatgagtattttagcagaaaccaatccaagactactccatttaaggactgcaagatt
ctaaaacagaggccgaggtttgttgcactgaagaagcaaccatcttatattggaggacat
gacagtttagagttaagagattatcagttaaatggactgaactggcttgcccactcatgg
tgcaaaggaaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaaca
atttcttttctgaactacctgtttcacgaacatcaactgtatgggcctttcttgctagtc
gtgccactttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatg
aatgctgtggtttacttaggagatataactagcagaaatatgataagaactcatgaatgg
atgcatccacagaccaagcgattaaaatttaatatacttctaacaacttatgaaattttg
ttgaaggataagtcattccttggtggtctgaattgggtatttataggagttgatgaagct
catcgtttaaaaaatgatgattcccttctgtacaagactttaatagactttaagtctaat
catcgtcttcttattactggaacccctctgcaaaactcccttaaagagctttggtctttg
ctgcacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggc
aaagggagagagttcggttatgcaagtcttcacaaagaacttgaaccatttttactcaga
agagttaaaaaagatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatg
gaaatgagtgcattgcagaagcaatattacaagtggattttaaccaggaattataaagcc
ctcagtaaaggttcaaaaggcagtacctcgggctttttgaacattatgatggaactcaag
aagtgctgtaaccattgctacctcattaaaccaccagatgataatgaattctataataaa
caggaagccttacagcatttgatacgtagcagtggaaaactaatccttcttgacaagcta
ctgattcgcctacgagaacgtggcaacagagtactgattttctctcagatggtgaggatg
ctagacatcctagcagagtatttgaagtatcgtcagtttccctttcagagacttgatgga
tcaataaaaggggaattgaggaaacaagccttggatcattttaatgcagaaggctcagag
gacttctgctttttgctgtctaccagagctggaggattaggtataaacttagcatctgct
gacactgtagttatatttgattctgattggaatccacagaatgatctgcaggcacaggct
agagctcataggattggacagaagaaacaggttaatatttatcggctagtcacaaaagca
tcagtagaagaagacattcttgaaagagctaagaaaaagatggtgttagatcacttagta
attcagagaatggacactacagggaaaactgtactacatacaggctctactccctccagc
tcaacaccttttaataaggaagagttatcagcaattttgaagttcggtgctgaggaactt
tttaaagaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcctg
aagagggctgaaactcgagaaaatgaaccaggtccactgactgtaggagatgagttgctt
tcacagttcaaggtggctaacttttcgaatatggatgaagatgacattgagttgaaacca
gaacaaaatttaagaaactgggaagaaatcattccagaagtccagcggcgacgaatagaa
gaggaagaaagacaaaaagaacttgaagaaatatatatgctgccaaggatgagaaactgt
gcaaaacagatcagctttaatggaagtgaagggaaacacagtaggaggagaagatattct
ggatctgatagtgactcagtctcagaaagaaaacgaccaaaaaaacgtggaagaccgcga
actattcctcgagaaaatattaaaggatttaatgatgcagagattaggcggtttataaag
agttacaagaaatttggtggcccacttgaaaggttagatgctatagctagagatgctgaa
ctagttgataaatctgagatagaccttaggcgtctgggagaacttgtacataatggatgc
attaaggctttaaaggacaattcctttggccaagaaagagcaggaggtagatttgggaaa
gttaaaggcccaacattccgaatatcaggagtgcaggtgaatgcaaagttagttttttct
catgaagaagagttggcaccattgcacaaatccattcctgcagatccagaagaaaggaaa
agatatgtcatcccatgccacaccaaggcagctcattttgatatagattggagtaaggaa
gatgattccaatctgttaataggtatctacgaatatggctatggcagctgggaaatgata
aaaatggatcctgatctcagtttgacacaaaagattttacctgatgacccagataagaaa
ccacaggcaaagcagttgcagacccgtgcagattacctcattaaattactgaataaagac
cttgcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaaaaaagca
agaagtaagaagaatagagcaacaaagactgcaaaaattaaagaagaaataaaaagtgac
tcatcaccaccctcagaaaaatctgatgatgatgagtataatgaggatgagattgtttca
gtgaaatgtccacataaaaaaataaaagcagaagaaaatgaaaaaaagcctgagccagat
attggtataaagatggaagctgtggaaaaaagagagacaagagaaaaagaaaataagagg
catttaaaaagagagaaaaaagaggataagaaagagttaaaaaatattaaagaaaagaga
gaaagcaaactaaaagaatccacacagaaagaaaaagaagtaaaggaagaaaaggcaaat
gaactcaaatctgaaaataaagaaaaaaataaaaaagtttcattgttggatattccagtt
catattactgcaactagtgaaacagttccaatatcagaagaatctgaagaactggatcag
aggacatttggtgtgtgcaaagaaagaatgaggcctgttaaagcagcattgaaacaattg
gatagaccagagaaaggcctttctgaaagggaacagctggagcatactagacagtgccta
atcaaaattggggaccacattactgaatgtctaaaggagtacacaaatcctgaacaaatt
aaacggtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgatgccaga
aagctgcacaagctgtataaacatgcaatcaaaaaacgccaagaatctcagcacagtgac
cagaatattagcaacaacatgaatacacatgtaattagaaatccaggtgttgaaagactg
aaggagaattcaaaccatgatgacagtagcagggatagttctgatagacatttgtcacag
tactatgatcatcataaggacaagcatcaggaagatgcttataataaaaatgactcaagg
aaaaggtcctgttcagccttcagcaatggaaaagaccacagagactgggatcactataaa
caagacagcagatactatagtgatggcaaacgtagaaagctggatgaccacaggagcaga
gatcagaggtcaaacctggaaggaagtttaaaagacagtcgacctcattcaaatcaccgt
tcccattcagaccacaggatacattcagatcaccgttccacttcagagtatatccatcat
aaatcttccagagattataggtaccactcagactggcaaatagaccacagagcttctggt
agtggcccaaggtcaccattagatcagaggtctccttatgggtcaagatctcctatagga
cacagatctccatttgaacattcatcagatcacaaaagtacacctgaacatacatggagt
agccggaaaacataa
DBGET
integrated database retrieval system
