Serinus canaria (common canary): 103823476
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Entry
103823476 CDS
T05755
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03082
ATP-dependent chromatin remodeling
scan03083
Polycomb repressive complex
scan04110
Cell cycle
scan04330
Notch signaling pathway
scan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103823476 (HDAC1)
03083 Polycomb repressive complex
103823476 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103823476 (HDAC1)
04350 TGF-beta signaling pathway
103823476 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103823476 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103823476 (HDAC1)
Enzymes [BR:
scan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103823476 (HDAC1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103823476 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
103823476 (HDAC1)
BRAF-HDAC complex
103823476 (HDAC1)
REST complex
103823476 (HDAC1)
SHIP complex
103823476 (HDAC1)
MiDAC complex
103823476 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103823476 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103823476 (HDAC1)
Chromatin remodeling factors
NuRD complex
103823476 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Dehydrin
Motif
Other DBs
NCBI-GeneID:
103823476
NCBI-ProteinID:
XP_009096801
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEF
SDSEDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKGEQQKEKAAAAATAAAEPKGVKEET
KST
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcagggcacgaagcgcaaagtctgctactactacgatggggatgttggg
aattattattatggccaaggacatcccatgaaaccccacaggatccgcatgacccacaac
ctcctgctcaactatgggctctacaggaagatggagatctatcgtcctcacaaggccaac
gcagaggagatgaccaagtaccacagcgatgattacatcaaattcctcaggtccatccgc
cctgacaacatgtctgagtacagcaaacagatgcaaagatttaatgttggggaggactgc
cctgtgtttgatgggctctttgagttctgtcagctctctgctggaggctctgttgccagt
gcagtgaagctgaacaagcagcagacagacatcgcagtgaactgggctggaggtctccac
cacgccaagaaatcagaagcctccgggttctgctacgtcaacgacatcgtgctggccatc
ctggagctcctcaagtaccaccagcgagtgctgtacattgacatcgacatccaccacggg
gatggggtggaggaggctttttacaccacagacagggtcatgactgtgtccttccacaaa
tatggagaatatttcccaggaactggggacctgagggacatcggggcaggcaaagggaag
tactacgctgtcaattacccgctgcgggacggcatcgacgacgagtcctacgaggccatc
ttcaaacctgtgatctccaaggtgatggagacgttccagcccagcgccgttgtcctgcag
tgcggctccgattccctgtctggggacaggctgggctgcttcaacctcaccatcaaaggc
catgccaagtgtgtggagtttgtgaagagctttaacctgcccatgctgatgctgggagga
ggggggtacacgatccggaacgtggctcgctgctggacctacgagactgctgtggctctg
gacactgagatccccaatgaacttccttacaacgactactttgagtactttgggccagac
ttcaagctccacatcagcccctccaacatgaccaaccagaacaccaacgagtacctggag
aaaatcaagcagaggctctttgagaacctgaggatgctccctcatgctcctggggtccag
atgcagccaattcctgaggatgctgtccaggaggacagcggggatgaggaggaggatgat
cctgagaaacgcatttccatccgaaattccaacaagaggatctcctgtgatgaggaattc
tctgactccgaggacgagggcgagggagggcgcaagaacgtcgccaatttcaagaaagcc
aaacgtgtgaaagcagaggaggagaaggaggaggaggagaagaaaggtgagcagcagaag
gagaaagcagcagcagcagcaacagcagcagcagaacccaaaggggtgaaggaagagacc
aaatccacctga
DBGET
integrated database retrieval system
