Serinus canaria (common canary): 103823687
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Entry
103823687 CDS
T05755
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X3
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03250
Viral life cycle - HIV-1
scan04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103823687 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
103823687 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scan03400
]
103823687 (SAMHD1)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103823687 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
103823687
NCBI-ProteinID:
XP_018779357
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MQQQHMEVMKVFNDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFE
HSLGVGYLAGCLVRALKERQRDLDITERDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTR
PDLNWKHETSSVQMFEHLITSNKLEEVMKSYGLVLEEDMLFIKEQIGGPIDETACVKSWP
YRGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIPNNFDYKRLLIFTRVCEVGNQ
KHICPRDKEVGNLYEMFHTRNCLHRRAYQHKTGNIIEIMITEAFQKADKFFEIRGSGGKV
YRISTAMEDMEAYTKLTDCVYLEILHSSHPELEEAREILRKIERRELYKFLGETRPESKK
EIIKSNSLAESIANSKPEKDPPDVELKAENFIVDVISMDYGMKEQNPIDKVHFYCKADPS
KAVKISKEQVSKLLPKIFMEQVVRVYYKSQDPHIISAAKQYFVQWCMQNDFTKPQDGDVV
APHLTPMKETWNNMTDDEHRRASEPSCKQRLSFDK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcacatggaggtgatgaaggtttttaatgatcctattcatgggcacatt
gagttgcatcccctgctggttcggatcatcgacacccctcagttccagcgcctccggtat
atcaagcagctgggcggaacgtactttgttttcccgggagcctctcacaaccgctttgag
cactccctgggggttggctaccttgcaggatgtctggttcgtgcactgaaggaaagacaa
cgagacctggatataactgaacgagacatcctctgtgtagaaattgctgggctttgtcat
gatttgggtcatgggccattttcacacatgtttgatggaagatttattccactcactcgt
ccagatttgaattggaagcatgaaacttcttctgttcaaatgtttgagcacttgatcact
tccaataaactagaagaagtcatgaagtcctatggtcttgtcctggaagaagatatgttg
ttcatcaaggaacaaataggaggtcctatagatgaaactgcctgtgtgaaatcgtggccc
taccgtggtcgaccaaaggagaaaagtttcctctatgagattgtagctaataaaaaaaat
ggcattgacgttgacaagtgggattattttgcaagggattgccatcacctggggatcccc
aataattttgactataagcgattgcttatcttcacccgggtctgtgaagtgggaaaccag
aagcacatctgcccccgtgacaaggaagttggcaatttgtacgagatgttccacacccgg
aattgcctgcaccggagagcataccagcataagacaggcaacatcattgaaataatgata
acagaagcctttcaaaaagcagacaaattttttgaaataagaggctctggaggaaaagtg
tatcggatttctacagcaatggaggatatggaagcctatactaaactaactgactgtgtc
tacctggaaattctgcactcaagtcatccagaactggaggaggcacgagaaattttgcgt
aaaatagaacgacgtgaattatacaagtttttaggagagactcgacctgaatcaaagaag
gaaattataaagagtaacagcctggcagaaagcattgctaattccaagccagagaaggac
cctccagatgtggagctaaaggctgagaatttcatagttgatgttatcagcatggattat
ggaatgaaggaacagaatccaattgataaggtgcacttctattgcaaggctgatccttct
aaggcagtcaaaatcagtaaagaacaggtttcaaagcttttacccaaaatatttatggag
caggttgtccgggtttattacaagagtcaggatccacatattatttcagctgcaaaacag
tactttgttcagtggtgcatgcagaatgatttcaccaaaccacaggatggtgatgttgtt
gctcctcatctaactccaatgaaggaaacctggaataacatgacagatgatgaacacagg
agagcctcagaacccagctgcaaacaaaggctttcttttgataagtaa
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