Serinus canaria (common canary): 103823699
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Entry
103823699 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-4
KO
K06762
contactin 4
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scan04515
]
103823699
Cell adhesion molecules [BR:
scan04515
]
Immunoglobulin superfamily
Contactins
103823699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_C17orf99
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
103823699
NCBI-ProteinID:
XP_030083891
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MRMLWELLVLHSVMLCLADDNSLHGPVFLQEPDSVIFPLDSEEKKVKLSCEVKGNPPPTI
GWKLNGSSIDVGMDFHYSLLGGALLINNPNKSQDAGTYQCVATNPFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEYPTFVHQDNRRFVSQETGN
LYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQLPRKARRHRSSGLLEIPNFQQEDAGLYECVAE
NVRGRNVARGQLTFYAQPSWTQQIRDVRAAIEERVSWECRASGRPKPSYRWLKDGEPLLP
QGRVQLEQGSLTIANVSLSDAGMYQCVAENRHGVIFANAELSVIAIGPDFSKTLLKKLTL
VKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKADAGSYTCV
ATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIMFTWSFNGH
LIDFEKDGDHFERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGIXIL
LLSPGPPEAVTIEEVTDSTAQLSWRPGADNHSPITMFVVQARTPFSVGWQAVSTVPEIID
GRTFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSK
SELVITWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASPDAARYVFRNESLPPFSPY
EVKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAPPWENQHKGR
IQGYEVRCWRHDEKEENAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAAV
NVTTKKPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRESSTSVIE
TNKTSVELSLPFNEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSA
LSTIMISLTARSSL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgctatgggagctgctggtgctgcactcggtcatgctgtgcctggcagatgac
aacagcctgcacgggccagtgttcctgcaggagcccgacagcgtcatcttccccttggac
tcggaggagaagaaagtgaagctgagctgtgaagtgaaaggaaaccccccaccaaccatt
gggtggaagttaaatggaagcagcattgacgtgggcatggatttccactacagcctgctg
ggaggagccctgctgatcaacaaccccaacaaaagccaggatgctggcacctaccagtgt
gtggccaccaacccctttgggaccatcgtcagcagagaggccaagctgcagtttgcctac
cttgagaacttcaagaccaggacgaggagcacggtgtccgtccggcagggccagggcatg
gtgctgctctgtgggcccccaccccactctggagagctgacctacgcctggatcttcaac
gagtaccccacctttgtgcaccaggacaaccggcgcttcgtgtcgcaggagaccgggaac
ctctacatcgccaaggtggagacctcggacgtgggcaactacacctgcgtggtgaccaac
accgtgaccaacagcaaggtcctggggccacccacgcccctcgtgctcaggaacgacggg
gtgatgggagagtacgagcccaaaatagaagtgcagttcccagaaactgttccatctgcg
aagggaaccacggtgaaactggagtgctttgccttgggcaacccagtgcccaccatcagc
tggaggagggcggatgggaagcagctgccgcggaaggcgcggaggcaccgctccagcggg
ctcctggagatccccaacttccagcaggaggatgccgggctctacgagtgcgtggctgaa
aacgtcaggggcaggaacgtggcacgaggacagctgacattttatgcccagcccagctgg
acgcagcagatccgcgacgtgcgcgcggccatcgaggagcgcgtgtcctgggagtgccgc
gccagcggccgccccaagccctcctaccgctggctcaaggacggggagcccctgctgcca
cagggcagggtgcagctggagcagggctccctgaccattgccaacgtgagtctgtcggac
gcgggcatgtaccagtgcgtggcggagaacaggcacggcgtcatctttgccaacgcagag
ctcagtgtcatagccatcgggccagacttctccaaaacgctgctgaagaagttgactctt
gtgaaggtgggtggtgaagtgatcattgagtgcaagcccaaagcctcccccagacctact
tattcttggaagaaaggaaaagacatcctaagagaaaacgagaggatcactgttctggat
gacgggagcctgcgcatcgtcaacgtcaccaaggcggacgcgggcagttacacctgcgtg
gccaccaaccactttgggacagccagcagcacgggcagcctggtggtgaaagatccaacc
cgggtgatggtgtcccctttcagcatggatgtcacagttggagaaagcattgtcctgccc
tgtcaggtgtcccacgaccactccctggacatcatgttcacctggtcattcaatgggcac
ctgatagacttcgagaaagatggggaccactttgaaagggtgggaggggattcagctggt
gatttgatgatcaggagcatccagctgaagcacgcagggaaatacgtctgcatggtgcaa
acaagtgtggacaagctctcagctgctgcagacctgattgtaagaggtatttgaattttg
ctgctgtccccggggccccccgaggctgtgaccatcgaggaggtgacagacagcacggcc
cagctgtcctggaggccgggggcagacaaccacagccccatcaccatgttcgtggtgcag
gcgcgcacgcccttctcggtgggctggcaggcagtgagcacagttccagagatcattgat
ggcaggacgttcacagccacggtggtggggctgaacccctgggtggagtacgagttcagg
gtggtggctgccaacctcatcggcatcggggagcccagcaggccctctgagaagagaagg
actgaggaggctctccctgaggtgaccccagctaatgtcagtggaggtggaggcagcaag
tctgagctggtcattacctgggagacagtgcccgaggagctgcagaacgggggtggcttt
ggctacgtggtggccttccggccgctgggcacggtcagctggatgcagacggtggtggcc
tcgccggacgccgcgcgctacgtcttccgcaacgagagcctgccgcccttctcgccctac
gaggtcaaggtgggcgtctacaacaacaagggggaaggctccttcagccccgtcaccgtc
gtctactcagcagaggaagagccaacgagagccccaaccactgttttggccagaagcatt
tctgcctcagacgtcgaagtctcctgggctcccccgtgggagaaccagcacaaaggaaga
atacagggatatgaggtgcgctgctggcggcacgacgagaaggaggaaaacgccaaaagg
atccggacggtggggaaccaaacatccaccaaagtcagcaacctgaggggcaatgccctc
taccacctggcagtcagggcctacaacacggctggcaccggcccctccagcgccgctgtc
aacgtcaccaccaaaaagccaccaccgagtcagcctcccgggaacatcgtgtggaattca
tccgactccaagatcatcctgaactgggaccaggtgaaagccttggacaacgagtcagaa
gtgagaggctacaaagttttgtacaggtggaacagggagagcagcacgtctgtgatagaa
acaaacaaaacctcagtggagctgtccctgccctttaatgaggattacatcatcgagatc
aaacccttcagcgacggcggcgacggcagcagcagcgagcaaatccgaatcccaaagatc
tccaatgcctatgccagaggctcgggctcatcgacctccagcgcctgcaccttgtcagcc
ctcagcacaatcatgatctccctcacagcccgctccagtttatga
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