Serinus canaria (common canary): 103824055
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Entry
103824055 CDS
T05755
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103824055 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103824055 (SMG5)
03032 DNA replication proteins [BR:
scan03032
]
103824055 (SMG5)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103824055 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
103824055 (SMG5)
DNA replication proteins [BR:
scan03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
103824055 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
103824055
NCBI-ProteinID:
XP_018779881
UniProt:
A0A8C9NH53
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MSQGGGAAGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQDVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQVGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSPSEDEEEYESGYSFLPDLLIFRMV
IICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTD
DQEPREPVNSIEKEAEAELANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHAQKVDESDLS
EGFDSDSSQSSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEE
GSSQGKSGPKEALKNCVDSSGLGDSKSPSISKTEAVDPVVNGPASLSTNDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSEPPALKDGIESKPCVNGDLEKPSLAEQDDVSDSE
ESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLALCDEVKDILSDAELPDLKASLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LALVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSSFSVP
MQSAIQAAANASIEIKNVLEFYKQWKEMG
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggtggcggggccgccggcgagagcggcgagccggaggccaaggtgctgcac
accaagcggctgtaccgggcagtggttgaggctgtgcaccggctggatctcatccttggc
aataaggcagcttatcaggatgtgttcaagccagagaacatcagcttgaggaacaagctg
cgggagctgtgcgtgaagctgatgttcctgcatccagtggattatggaagaaaagcagaa
gaactgctctggagaaaggtttactatgaagttatccagctcattaaaactaataaaaag
cacatccacagccgcagcaccctggagtgtgcatacaggactcacctggtggctggcata
ggattctaccagcacctcctgctctacatccagtcccactaccagctggagctgcagtgc
tgcatcgactggacacatgtgacagaccctctcataggctgcaagaaacctgtgtctgca
tcagagaaggagatggagtgggcacagatggcctgtcaccggtgtctggtttatctggga
gatctagctcgctatcagaatgagctggcaggtgtggacacggagctgctggctgagcgg
ttttactatcaagccctttctgttgcaccacaagttggaatgcccttcaaccaactgggg
acattggcagggagcaagtactacaatgtggaagcgacctactgctacctacgctgcatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcgtctgtatgacaaagca
gccaagatgtaccatcagctgaagaaatgtgagacccggaagttgtctccaagcaagaaa
cgaggaaaagacattaagagattgctggtgagcttcatgtacctgcagagtcttttgcag
ccaaagagcagctctttggattctgagctgacatctctctgccagtctgtgctggaggat
ttcaacctgtgcttgttctacctgccctctcctcctaacctgagctcacctagtgaagat
gaagaagagtatgagagtggttactccttccttcctgatctcctgatttttcgcatggtg
atcatctgccttatgagtgttcacagcctcaagagggcaggttccaagcagtacagtgca
gccattgccttcacactggctctcttctctcacctgataaatcacgtcaatattcgtctc
caggctgagctagaagaaggggaaaatcctgtcccagcctttcagagtgatggcacagat
gaccaggagccacgggagcctgtgaactcaattgagaaggaagctgaagctgagttggcc
aatcatcagcccagcgaggagcagcggaagaatgactgcaagaaaagcaagaaatactct
cgtctgtcctgtctgcgccgccgccgccacgcccagaaggtggatgagagtgacctgagt
gagggctttgactctgactccagccagagctccatcaagggcagtgatggctcagagagt
ggctcagagaagagtgacgaggaagcagaagctgcttttgatgtggagacagactccgac
atgaacagccaagaatctcggtctgacttggaggacatggaggatgaaccgggtgaggaa
ggaagcagccaaggcaaaagtgggcccaaagaggccttaaaaaactgtgtggatagcagt
gggctgggggactccaagagcccaagcatctctaaaactgaagctgtggatccagtggtc
aatgggccagcttccctgagcactaatgatgcaagcatagccagtaatctccaggccatg
tccacccagctgttccagaccaaacgctgctttcgcttggctcccacgttcagcaacatc
ctcctgaaacccaacagtgaaccacctgccttgaaggatgggatagagagcaagccatgt
gtcaatggagatctggagaagcccagcttggcagagcaagatgacgtgtctgactctgaa
gaaagcatttcaagtaacaaatcctgcagaaatgaacgatcccttcaggagaagttggag
attgtgaccaatgaagggctgctgcttactgtcaaggtgttcctggactggctgaggaca
aacacagacctcatcattatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgcttctgaaccttctgccttctgctgcagacctgcaggaatcagggctggccctgtgt
gatgaagtcaaagacatcctgagtgatgctgagctcccagacctgaaggccagcctgcta
ctccctgaggacgtggccctgcgcaatctcccccctctgaaaaatgcacacaagaggttt
aacttcgagcaggatcggcccattttctctgcagtcgaggagtctgtcgtgcgcatctgc
tgcattcggagcttcggccacttcattacccacttgcaaggcagcatcctgcagttcaac
tcagagcttgggatcttcatcagcatagcacagtcagagcaagacaacttgttgcaccag
gctcaggctcagtttcacatggctgcagaggaagctcgtcggaacaggctcatgagagac
atggctcagcttcggctgcagctggaggtgtctcagctggagggcagtctccagcagccc
aaggcacagtcagccatgtctccttacctggttcctgacacccaggccctctgccagcac
ctggctcttgtcaagcagctggccactagtgggaggttcatcatcatcatccctcgaaca
gttatcgatggcctggacttcctgaaaaaggagaacgccggtgctagggacagcatccgg
tatctggaggcagaatttaaaaagggaaacaggtacattcgttgccagaaagatgttggg
aagagctttgagaggcataaattgaagagacaagatttagatgcctggaatctctataaa
atactggacagctgcaaacagctgacagtgtcccagggcagtggggaggatgacaccaca
ggaatggtcaccatcatcacaggcttccagctggaggacccgagctccttctcagtgccc
atgcagtctgccatccaggcagccgccaacgccagcatagagataaaaaatgttctggag
ttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
