KEGG   Serinus canaria (common canary): 103824293
Entry
103824293         CDS       T05755                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
scan  Serinus canaria (common canary)
Pathway
scan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103824293 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scan03019]
    103824293 (WDR82)
   03036 Chromosome and associated proteins [BR:scan03036]
    103824293 (WDR82)
Messenger RNA biogenesis [BR:scan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103824293 (WDR82)
Chromosome and associated proteins [BR:scan03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     103824293 (WDR82)
    COMPASS/SET1 complex (yeast)
     103824293 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 NBCH_WD40 PEP5_VPS11_N Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C MinC_C
Other DBs
NCBI-GeneID: 103824293
NCBI-ProteinID: XP_009097784
LinkDB
Position
Unknown
AA seq 326 aa
MPLTRPPTPQSARTGGTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVL
YDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHT
KRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVN
SEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGA
VLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITC
LQFNPKFMTFASACSNMAFWLPTIDD
NT seq 981 nt   +upstreamnt  +downstreamnt
atgcccttaacccggccccctacgcctcaatcggcacggactggcgggacggacaacgtg
ctgcggagcttccgcgtggctaaggtcttccgcgagaactcggacaagatcaactgcttc
gactttagccccaacggcgagaccgtcatttccagcagcgacgatgactccatcgttctc
tatgactgccaggagggcaaaccaaagaggaccctgtacagtaagaagtatggagtggac
ctcatcagatacacacatgctgccaacactgttgtgtacagctccaacaaaatagatgac
acaatccgatacctctccctgcatgacaacaaatacattcgctatttcccggggcacaca
aaaagggtggttgctctttcaatgtctccagtggatgatacttttatttctggatctctg
gataaaactattcgtctttgggatctccgctctccaaattgccagggtttaatgcatctc
caagggaagccagtgtgttcttttgacccagaagggttgatttttgctgctggagtcaat
tctgaaatggtgaagctttatgatctccgttcttttgacaaggggccatttgctacgttt
aagatgcagtatgaccgaacgtgtgagtggacaggcctgaagttcagcaatgatgggaaa
ctcatcctcatctccaccaacggcggcttcattcggctcatcgatgccttcaaaggagct
gtcttgcacacatttgggggttataacaatagtaaggctgtcacgctggaggcatcattc
acaccagactctcagttcatcatgataggttcagaggatgggaagattcatgtttggaat
ggagaaagtgggatgaaagtggctgtcctagatggaaaacacacaggtcctataacctgt
ctgcagttcaatccaaaattcatgactttcgctagtgcatgttccaatatggccttctgg
ttgccgactattgacgactaa

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