KEGG   Serinus canaria (common canary): 103824388
Entry
103824388         CDS       T05755                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
scan  Serinus canaria (common canary)
Pathway
scan04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:scan00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103824388 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scan04131]
    103824388 (WDR7)
Membrane trafficking [BR:scan04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    103824388 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML CFAP251_N EIF3I ASA1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_ACSF4 DSE1_N Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd PAC11 Beta-prop_HPS5 Beta-prop_SCAP WDR72_alpha-sol Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Tricorn_2nd PD40 Beta-prop_DCAF4 LRS4
Other DBs
NCBI-GeneID: 103824388
NCBI-ProteinID: XP_009097900
LinkDB
Position
Unknown
AA seq 1481 aa
MAGNSLVLPIVLWGRRAPTHCVSSLLLVDGSVIVTGCHDGQICLWDLAPDLQINPRALLF
GHTASVTCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFTV
GTQREGRLLCHGHYPEILVVDATSLEVLYSLISKISPDWISSMAIIRSNRTQEDTVVAVS
VTGILKVWIITSEVSRMQDTTPVFEEESKPIYCENCQSISFCAFTQRSLLVVCSKYWRVF
DAGDYSLLCSVPSENEQTWTGGDFVAADKVIVWTEDGQSFIYKLPASCLPASDSFRRDVG
KAVENLMPPLLYSVLDRAEKQLLICPPVTRFFCGQREFSYRLLIQGDSSGRLCIWSVPDT
LEQQQGAKGLQATTSRSLQEAFDQLSPRPAGIIDQLSMVANASEPLRVTASVYMPAHGRL
VCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYD
QRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVASDHS
VGLLSLREKKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCVMGI
TAVEILSACDEAVPAAVDALSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEAS
DKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPSAALVSPENLQ
KAPGGADKGGSFLAGKRAAVLFQQVKETIKENIKEHLLDDEDEDEEAVRQRREDGDPEYR
SSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSRG
GHMSLMLPGYNQPVGGAALQQLGRKVSVSEGPGKGTYGVSRAVTTQHLLSVISLANTLMS
MTNATFIGEHMKKGPSRPPRPGTPEMAKVKPPPPVSSHAAQGQIKQVAPAAASSTESGHS
DTSAFHSCFLVNEGWSQLAAMHCVMLPDLLGLEKFRPPLLEMLARRWQDRCLEVREAAQA
LLLAELRRIEQAGRKETIDTWAPYLPQYMDSVISPGVTTEALQSASAPPDPSGAEAKVQE
EEHDLVDDDIAAGCLAGLPQPKKVSTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTR
PRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSARLPAHSTIRRTAIDLIGRGF
TVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPPA
FITTIAKEVHRHTALAANTQSQQNIHTSTLARAKGEILRVIEILIDKMPSDVVDLLVEVM
DIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQT
IHGHKGPITAVAFAPDGRYLATYSNSDSHLCFWQMNTSLLGSIGMLNSAPQLRCVKTYQV
PPVQPASPGSHTALRLARLIWTSNRNIILMAHDGREHRFMV
NT seq 4446 nt   +upstreamnt  +downstreamnt
atggccgggaacagcctggtgctgccgatcgtgctgtggggccggcgcgcccccacgcac
tgcgtgtcctccctgctgctcgtggatggctctgtcatcgtcaccggctgccacgacggg
cagatctgcctctgggacctggctcctgacctgcagatcaatcccagagctctgctcttt
ggtcatacagcctcagttacttgtttatccaaggcctcagcttccagtgaaaagcaatat
atagtgagtgcatcagagagtggggagatgtgcctgtgggatgtgaacgatgggaggtgc
atcgagttcaccaagctggcctgtgcacacacgggcatccagttctaccagttcacggtc
ggcacgcagcgggaagggaggctcctgtgccatgggcattaccctgaaattctggtggtg
gatgcaaccagccttgaggttctttactcgctgatatccaagatctctcctgactggatc
agctccatggccatcatccgctccaacaggacacaagaggacactgtcgtggctgtgtcc
gtgactggcatcctgaaggtctggatcatcacctccgaagtcagtcggatgcaggacacc
acgccggtgtttgaggaggagtccaagcccatctactgcgagaactgccagagcatttcc
ttctgcgccttcacgcagcgctcgctcctcgtcgtctgctccaagtactggagggtcttt
gatgctggagattattccctcttatgttcagtgcccagtgagaatgagcagacctggact
ggtggggactttgtggcagctgataaagtgattgtatggacagaggatggacagagcttc
atctataaattaccagccagctgcctcccagccagcgattcgttccgcagggatgtgggg
aaggcagtggagaacctgatgccacctttgctgtacagcgtgttggacagggcagagaaa
cagctcctgatatgtcctccagtgactcgcttcttctgtggccagagagagttttcctac
aggctcttaatccaaggggactcctcagggaggctgtgcatttggagcgtgcccgacacc
cttgagcagcagcagggtgccaaaggcctgcaagcaaccacatccaggtccctgcaggag
gcctttgaccagctgagcccgcggcccgcggggatcatcgaccagctgagcatggtggcc
aacgccagcgagccgctgcgcgtcaccgccagcgtctacatgccggcccacgggcggctg
gtgtgcggccgcgaggacggcagcatcgtcatcgtgcccgccacgcagaccgccatcgtg
cagctgctgcagggggagcacatgctgcgccgaggctggcccccccaccgcacgctccga
ggccaccggaacaaggtcacgtgtctgctgtaccctcaccaggtgtcctcccgctacgac
cagaggtacctcatctcaggaggggtggatttctccgtcatcatctgggatatcttctcg
ggagagatgaaacatatcttctgtgtccacggcggagagatcacccagctgctggttcca
ccagaaaactgcagtgcccgagtccagcactgcgtttgctctgttgccagcgatcactcc
gtgggcctgctgagcctgagggagaagaagtgcatcatgctggcatcccgccacctgttc
cccatccaggtgatcaagtggaggccagctgatgactacctggtggtgggctgctccgac
ggctccgtgtacgtctggcagatggacaccggggcgctggaccgctgcgtgatgggcatc
acggccgtggagatcctgagcgcctgcgacgaggccgtgccggcggccgtggacgcgctc
agccaccccgccgtcaacctgaagcaggccatgacccgccgcagcctggctgccctcaag
aacgtggcccaccagaagctgcagaccctggccaccaacctgctggcttctgaggcctca
gacaaggggaatttacccaaatactcccacaactccctgatggttcaggccatcaagacg
aacctgacggacccggacatccacgtgctgttcttcgacgtggaggcgctgatcatccag
ctgctgaccgaggaggcctcgcggcccagcgccgccctggtgtccccggagaacctgcag
aaggcgcccggcggcgccgacaagggcggctccttcctggccggcaagcgggcggccgtg
ctcttccagcaggtcaaggagaccatcaaggagaacatcaaggagcacctcctggatgac
gaagacgaggatgaggaggccgtgaggcagaggagagaagacggcgacccggagtatcgc
tccagcaaatccaaaccgctgactctgctggagtacaacctgaccatggacacggccaag
ctcttcatgtcctgcctgcacgcctggggcctcaactcggtgctggacgagctgtgcctg
gatcgcctgggcatgctgaagccgcactgctccgtgtccttcggcctcctgtcgcggggc
ggccacatgtccctgatgctgcccggctacaaccagcccgtgggcggggcggccctgcag
cagctgggcaggaaggtgtcggtgagcgagggcccgggcaagggcacctacggcgtgtcc
cgggccgtcaccacgcagcacctgctgtccgtcatctccctggccaacacgctgatgagc
atgaccaacgccaccttcatcggggagcacatgaagaaagggcccagcaggccacccagg
ccgggcacccccgagatggccaaggtgaagccgccccctcccgtgtccagccatgcagca
caagggcaaatcaaacaagttgctcctgctgctgcttccagcacggaatctgggcactct
gacacttctgctttccattcctgtttcttagtcaacgaaggctggagccagctggctgcc
atgcactgcgtgatgctgcccgacctgctggggctcgagaagttccggccgcccctgctg
gagatgctggcccgcaggtggcaggatcgctgcctggaggtgcgggaggcggcgcaggcg
ctgctgctggccgagctgcgcaggatcgagcaggcgggccgcaaggagaccatcgacacc
tgggccccctacctgccccagtacatggacagcgtcatctcccctggagtgaccacagaa
gcccttcaaagtgccagtgcccccccagatccctcaggagcagaggccaaggtgcaggag
gaggagcacgacctggtggatgatgacattgcagcaggctgcctggcagggctgccccag
cccaagaaggtgtccacgtcctacgaggagaggcgcaagcaggccacggccatcgtgctg
ctgggcgtcatcggcgccgagttcggagccgagatcgagccgcccaagctgctgacgcgg
ccccgcagctccagccagatccccgagggcttcggcctcaccagcgggggatccaactac
tccctggccaggcacacctgcaaggcgctgacgttcctgctgctgcagccgcccagcgcg
cggctcccggcgcacagcaccatccgccgcaccgccatcgacctcatcggccgcggcttc
accgtctgggagccctacatggacgtgtcggccgtgctcatggggctgctcgagctctgc
gccgacgccgagaagcagctggccaacatcacaatggggctgcccctgagccccgcggcc
gactcggcgcgctcggctcgccacgcgctgtccctgatcgccaccgcccgcccgcccgcc
ttcatcaccaccatcgccaaggaggtgcacaggcacacggcgctggcggccaacacgcag
tcgcagcagaacatccacaccagcacgctggcccgcgccaagggcgagatcctgcgcgtc
atcgagatcctcatcgacaagatgccctccgacgtcgtggacctgctggtggaggtgatg
gacatcatcatgtactgcctggaaggatctttagttaagaagaagggtcttcaggaatgt
tttccagccatctgcaggttctacatggtgagttactacgagcgcagccaccgcatcgcc
gtgggagcgcggcacggctccgtggcactctacgacatccgcacgggcaagtgccagact
atccatggccacaagggacccatcactgccgtggcgttcgcccccgacggccggtacctg
gccacctactccaactctgacagccacctctgcttctggcagatgaacacctccctcctg
gggagcatcggcatgctcaactccgcaccccagctgcgctgcgtcaagacctaccaggtg
ccgccggtgcagccggcctcgcccggctcgcacaccgcactgcgcctggcccgcctcatc
tggacctccaaccgcaacatcatcctcatggcccacgacggcagggagcaccgcttcatg
gtctag

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