Serinus canaria (common canary): 103824397 Help Entry 103824397         CDS       T05755                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism scan  Serinus canaria (common canary) Pathway scan04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:scan00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     103824397 (DCHS1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:scan04515]     103824397 (DCHS1) Cell adhesion molecules [BR:scan04515]  Cadherins   Cadherin related    103824397 (DCHS1) SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Ig_Cad99C_N Ig_CLSTN Cadherin_CELSR2_9th RET_CLD1 PepSY Sharpin_PH CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  103824397 NCBI-ProteinID:  XP_030090497 LinkDB All DBs Position Unknown AA seq 3266 aa AA seqDB search MEQMKRSTMLLLELLILGGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYTIKGGNVGQAFRLETR RGPNGVLYLDLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY SIGSGIGSVIPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVRGNSPPLFSL NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQY FFSVPEDMPQGATVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE SQAVLVLDVQARSGSPPAYSNTRVKISVSDVNDNTPAFPAPSDSILLPEATEPGTTVYTL QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQYEAISAYSLAIVARDSGVP QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVEPTALTYHL RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGAAADTRKTGTSTVRVS VTDENDNSPRLSEERYFFTVSENQAPGSTVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH TQTGEVSTKHSLDREQQSNFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTAAVL RRAERAEYLFTVTASDRGAAPRSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV IGSVAPPDAPARGQLTYTVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDT QHGYPSSRLVLVHIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS QVRYALLHLEPPGAPFQLDGRSGQLTLRQGLDREAAASFLLVVEATDQARNVSQRRSAAV TARVFVTDENDNVPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNAD GRFHLNPSTGALSIVRALNREEVAQHNLTVVAMDHGFPRLSATQLLSVLVLDINDEAPVF EKPEYQAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL DREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLESESCSVEVPENQSRVAL YTLRATDPDGGENGRLEYRVADGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPQSGRVRSAQALDRERQPTYSFLAKAVDSAPWEPRSAAVRITVV VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTRD VALSENAAPGTEVASVQAMHMGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQGYDSPVIQVL ADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL LEGDMADTFGVLRYGGHIALTGPLDHEERSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPHFQESCYNATVPEDL RPGTTVLMLEAGDADLSRENAGFDYTIVSGNSGNAFQVESRVAWAGGQLRTQGALVLVES LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEYRAAVSEAALPGT ELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLARPLDREAQALHTLVVRA TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADSGAFG ELRYVVLEQAVGDPSTGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQSIGRVLATDEDEGVDGVVLYTLAKP SPYFAINQTTGSIYLRVDSQPQAGAGRAKREPREMSLEVQARSPLPASRVASVQVTIDVT HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEAEGALARAHSG SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL LPGPPLQLYREDGGGSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKSRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHSSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG ISQGPSTSTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg agagcagggatgggctctgctgtcctgggcaccctggatctacaaatagatgaggagcag ccagctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagtggcgtctccactgacttggggatagatgag aatacagggatcatcaaaacagctcgtgtcctggaccgggagactcgggaccgctacagc ttcattgctgtcaccccagagggcatcacggtagaggtgaacatccaagtgaatgacatc aatgaccatgccccagcgtttcccaaacagcacagcacctttcagatcccggagcacaca cccattggcagcaggtttcccttggacccggcctttgatgccgacagtggcctcctgaac acacaaggctacacgattaagggagggaatgtggggcaggccttccgcctagaaacgcgt cgaggacccaatggggtcctgtatctggacctggtggtcagcaacgttctggatcgggag aaccgttcctcatactcactgctgctggaagcctacgatgggggttctccgccccggagc acccagatgacactggatgtgtccattcaggacatcaacgacaatgcccccagcttcaac cagagccgctatcacacgctcatttcagagaatctgaaacctggcagcagcatcctgcag gtctttgcctctgatgcagatgaaggtgacaatggggatgtgatttacgagatcaaccga cggcagagcgatcctgaccagtacttcaccatcgatgcccgaactggagtcatcaagctc aacaaaggtctggactatgaagtgaggaaggtgcatgagctggtggtgcaggcaagggat aaggctgtccatcctgaggtcaccacagcctttgtcactatccatgtgcgtgactacaat gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacagatctcc gagggagcccagcccggacagtacgtggcacgcatttctgtttccgatcccgactatgga gagtattccaatgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc aaggacaacataatctatctgatctgtgtggaccaacttctggatcgggaagaaagagac tcctatgatctgcgggtgacagctactgactcaggaacacccccgctccgggcagaatca gcctttgtgctgcaggtgatggatgttaatgacaatcccccgctctttgaccagcaggag tacaagcagagcatccctgaagtagtgtacccaggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaatggtgaggtgcggtacagcattctgcatggccgcgac acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca ctggattatgaaaaggatcctcagcctcagctcactgtgctggccacagaccggggaacg cctgccctctcttcctcagctgtggtgcacgtggccttgcaggatgtcaatgacaatgag ccagtgttcaggagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc tgtttcttacaggtgacagccacagacgcagacagtggtgcgtttggctccctttcctac tccattggctctggcatcggcagtgtcatccccacgcagttcagcattgacaagcactcc gggcagctgtgcacggtgcagcccctggaccgtgatgagggcacgtctgcctacgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaggtgttcctg gaggacacgaacgacaaccggccagtgttctaccctctggagtacgctgccagcatcagc acccagagcatgccggggacggccgtgctgcgtgtcactgcccacgacaaggacgagggg ctcaatgggagggtgacataccgcatcgtccggggaaactcgcccccgctcttctccctc aacaaggacacaggtgtcatttctctgtcctggtctctgagtggcaaagccaacaccctg gtgcagctggtgatctctgctcaggatggggggggcctgcaggcacagccaaatgcccgg gtaaacatcagcatcgtggagggcacagtctcaccccctgtctttgagcaagctcagtac ttcttcagcgtgcccgaggacatgccacagggcgccactgtgggggctgtccaggcccag aacccgccaggtcatgctgatgatatcttctattccatctcctcgggggaccctcatggc tatttctccatcgactctgcctcggggcagctccgcaccagcctgcctctggatcacgag tcccaggcggttctcgtcctggatgtccaggcccggagcggttcaccccctgcctacagc aacacgcgtgtgaagatctccgtgtcagatgtgaatgataacacaccggctttcccagct ccctctgactccattctgctgccagaggccacagagcccggcactacagtctacaccctg caggctgaggaccgtgacagcggtgccaatgggcaggtgacctttgagctggtctcggga ggtgagggcacctttgtcgtggagcgtgcctcgggggcagtgcggctcctgggggccctg cagtacgaggccatctcagcctacagcctggccatcgtggcccgggacagtggcgttccc cagctcagctccaccttcacgctgctggtgcacgtgcaagctgaggacgacaacggaccc atctttgacaccctcacctaccgtgtggaggtgcaggagggtgttcccgtctctacgcgc ttccttcaggtgagggccctggcacacgatgtggaacccacggccctcacctaccacctg cgtgcagatggggacgctgccagcttcggcatcgtgcccgagagcggctggctgtacgtc aagagtgccctggaccgggagacgcgggacctgtacgtgctgacagtgctggcctcagtg ggaggcaccggggccgcggcagacacacggaaaaccggcaccagcaccgtgcgcgtcagc gtcaccgatgagaacgacaacagccctcggctgagcgaggagcggtacttcttcaccgtg tctgagaaccaggctcctggcagcaccgtggggagggtgatggcaagcgaccgggacgcc gggcagaacagccggctcacctaccgcctgctccagcatgaccccaactttcttatccac acacagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccaacttc cagctcctggtgattgtgcaggatgggggagcaccgcctcgcagtgccaccggaaccatc tatgtcactgtgctggatgagaatgacaacgctcctgctttcctccatgtgggcagtggt caggagctaactgtgcaggtgctggaagagaagccatcgggactcctggtcgcctccctg caggccaaggaccctgatgagggggagaacgggaccatcatctactccctgataggggcc tgggcagagcgtttcaccctgcacgtggccaccggagagctgcgcacggcggcggtgctg cggcgggcggagcgggccgagtacctcttcacggtgacggccagcgaccgcggcgcggcg ccgcgcagcacctcggccatcgtccgtgtgcaggtgttgccatcctcccgtgtgctgcca cggcctgatgccactgtgttgaccctgcatcccctcgagggcgtcaagccggggtctgtg attggttcagtggcccccccggacgcccctgcaagaggacagctgacctacacggtggta ggaggtggtggggatggcacctttgtggttgatagtatgacaggggagatttacgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgctgaggacacg cagcacggctatccctccagcaggttggtgctggtccacatccacgtgcaggactgcaat gaccaggcacccaccttccccgaagaccccattactattgtggtgcctgagaatgcccag gctggctcctccatcttcaccttccaggctctggatggggatggagtgggccccaacagc caggtgcgctatgctctgctgcacctggagccacccggagcccccttccagctcgatggc cgctcggggcagctgaccctgcgccagggtctcgaccgggaggccgctgcctccttcctg ctggtggtggaggccacggaccaggcgcgcaacgtcagccagcgccgctcggccgccgtc acagcccgcgtgttcgtcaccgacgagaacgacaacgtgcccgtcttcctctccccggcc accgtcagcgtcatggaggaccagcccacgggcttcgtggcactgcatgtggtggcccag gacagcgatctgggagagaacggacgtgtgagctactccttgcgagcaggaaatgccgat ggccgcttccacctgaaccccagcactggtgcactctccatcgtgcgggccctgaaccgg gaggaggtggcgcagcacaacctgacggtggtggccatggaccacggcttcccacgcctc tcggccacacagctgctgtccgtgctggtgctggacatcaatgatgaggctcctgtcttt gagaaacccgagtaccaagcccacatcatggagaacctgccagccggcagcccggtgctg caggtgctggccacggaccgggatctgggtgccaacgggcaggtgtcctatggaggtctc tccggggggccattctccatccatccacagacagggctcattgtcaccacgcgtcccctg gaccgggaggagcaggagcagcacgtgctgacagtctatgcacgggatgctggcctgccg cccagcctcaccaaggccacggtgtgggtcacagtgggggatgagaatgaccatgcaccc cacctggagagtgagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc tacaccctgcgggccactgatcctgatggtggggagaacggacgcctggaataccgggtg gcagatggagaccctgggcaggatttcagcctagaccccgtctctggtgtcctctccact gcacatgccctcgaccgagagcaaattgcttcctacagcctcattgtagtggtgcaggac cacggctctcccccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat gataatgcacccagttttgctcaggccagctacacggtggaggtgccagaggacttgccg gtcggtgccctggtgctgcagctggtggctgaagacccggatgagggcaccaacgggcag gtctcctactacctgggcaacgagtcgctgggcatgttccaggtggagccacagagcggg cgcgtccggagtgcccaggcactggaccgggagcgccagcccacctacagcttcctggcc aaggcggtggactcggcgccgtgggagcccaggagcgcggctgtgcgcatcactgtcgtg gtgcgagacgtcaacgaccacgtcccggccttcctgcacagcccgctcaccgtcaacttg tcccgccacacgccgctcaagcaggtggtggccaccatgagggccgaggacagggacgca ggtgccaatgcctccatcctgtaccgctttgccacccccagctctgccttcgccatcaac tcctacacgggggacatccagctgctgcagccccttggctccctcagccagcgccagcgg acgctcttcgtgctggccatggacctggggcagccagcgctctcctccacaggggtggtg gtgatccacgtgcaggaggagccctaccgggggctgcgctttcctcgcagcaccagagat gtggccctgtccgaaaatgccgccccaggcactgaggtggcgagtgtccaggccatgcac atggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagtagcctggacttc gaggccagccctcggctgcgcctggtgatccaggcagagactgcagcttcctttggcttt atggccatcaacctcaacctccaggatgtgaatgacaacctgccccgcttccagctgcag aactatgtggcattcatctgggagtcacagggctatgactcacctgtcatccaggtgctg gcagatgacctggaccagggagtaaatgggcaggtgacttatgccatcaaccagtccctg ccaatgccgggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca ccaccgctgatgggctcggccacgctgaccgtggtggtgatggacatcaacgacaatagc cctaccatcccggtcccctgggagatccgtgtccctgagaacacactgctgggcacccag atagcccagctgactgggaacgatgtggactcaggcccagcactctcctacacgctgctg ctggagggggacatggcagacacctttggggtgctgcgctacgggggccacattgccctg acggggccgctggaccacgaagagcgcagccgctacaccctgaccctgcgcgcctctgac actcgccacgagactgaggccaacctcaccgtcctcgtggaggatgtgaacgacaatgtg cccaccttcacccaggttttctatcaggtgctgctgccagagcacacacctgctggcagt gtcatcctcactgtgagtgcaactgaccccgactcagggagcaatggggacatcaccttc cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc acccggcaggtggagttcaatgccagccagcccaccctggacctagtggtggaggcccgc gaccatggttctcccagcctctcatcctgggccacagtgcagctccaggttctggatgtt aacgaccacagcccccacttccaggagtcgtgctacaacgccaccgttcccgaggacctg cgcccaggcaccacggtgctgatgctggaggcgggtgacgccgacctctcccgggagaac gccggctttgattacaccattgtcagcggcaacagtggcaacgccttccaggtggagagc cgggtggcctgggccggggggcagctccgcacgcagggagccctggtgcttgtagagtcc ctggactttgaggccatcccagtgtacaacttgacggtggcagcctcggaccggggcctg ccgcagcgcagtgccaccgtgcctgtgctgatcaccgtgcaggacgtcaatgacaacccg cccgtgttcagccgggccgagtaccgtgcggcggtgagcgaggccgccctgcctggcacc gagctgctgcgcgtggccgcccacgacgccgactcagggccgcgcggccgtgttcactac accatcagctcgggtgaccagcatgggctgttccagctgcatgagagcacaggggccctg agcctggcacggccactggatcgggaggcccaggcgctgcacacgctggtggtgcgggcc acggacacaccgggtgggcactttgcactggtccccgtggccattgaggtgaaggacatc aacgacaacaagccatacttcccagtggaggtgctgagcgccagcatccgggagaacttg ccccccggcacgctggtgaccacgctgcgtgctgtggatgccgacagtggtgcctttggg gagctgcggtacgtggtgctggagcaggcagtgggggaccccagcacgggagacggccgg gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgagccaaagccttccagctgctggttcgggccactgatgccggcaatgcctcggcc actgtgactgtgcgggtgctggtgacaggggaagatgagtatgatcccatcttcctgagc ccctccttcaactttgaggtgcctgagggcgcgcgcaaagggcagagcattgggcgtgtg ctggccacggatgaggatgagggggttgacggtgttgtgctctacaccctggcaaagccc tcaccatactttgccatcaaccagaccacgggctccatctatctgcgtgtggacagccag ccccaagctggggctgggcgtgccaagagggagccacgggagatgagcctggaggtgcag gcacgcagcccactgcctgcttcccgtgtggcctctgtgcaggtcaccattgatgtcacg cacacctcctttggcctggcacctgacctcaacctcctgctggtggccgtggccgcctcg ctgggcgttgtggtggtgctggctgctgtggccatcgtgctggccttggtgcgctcccgg cagcgccggggccacaagaaggcagaggcagagggggcgctggcccgtgcacacagcggg tccttgcagaagctgggccgtgaggagccagcgctgcctggggctgagcacatctaccac caggcgctgccagggtatgggactgagccggcggggccctacacgcggggtggctccctg gacccctcgcattccagcggccgtggctctgctgaagccgctgaggatgatgagatacgg atgatcaatgagtacccacgcgtggccagcatcacagcctccatgcaggagcacatcgct gcccgcggccctgactctggcatccagcaggatgctgaccagctctccgacatctcctgt gagccagctgcattggagagtgcccagtggttcaagagcaagaagggctctgggctgctg ctgccagggccacccctgcagctgtaccgcgaggacgggggaggcagcgccttcctgggc gtccgctgcggcctcagcgtctcctcacagccccaggactacgccttcccagaggacggc aagccctccgtggagggatcgctcaccgccattgtggccagcgatgaggagctccgcggc agctacaactgggattacctgctgaactggtgtccccagttccagccactggccagtgtc ttcacagagatcgcccgcctcaaggatgagagctccctgcgcaagcccttcccggccaag cccaaggcagagcccaagtcccgcattgaccccccgcccctcatcacctcagtggcccat ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcactcatcc tccctgcgccgctcgccgattagccacgagggttccatctcgtcctctgccatgtcgccc agcttctccccgtcgctgtccccgctggccgcccgctccccggtggtctcgccctttggc atctcacaggggccatccacctccaccatcagtgctgagcactcgctggagccccctgag gaggccgagctcaggatttag

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