Serinus canaria (common canary): 103824456
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Entry
103824456 CDS
T05755
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103824456 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
103824456 (SLIT2)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Axon guidance molecules
103824456 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_TGFA-like
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
103824456
NCBI-ProteinID:
XP_009098008
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MMCGWGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGT
EDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLE
ATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQHKMFKGLESLK
TLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCN
CHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLARCPA
ECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI
STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS
ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG
PVDVNILAKCNPCLSSPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCHHG
GTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYT
GELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGA
QCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLS
GYQGEKCEKLISINFINKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVE
LYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSK
QSTLNFDSPLYIGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGI
LPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPIN
AFSYSCKCLQGHGGVLCDEEEMLLNPCQSIRCKHGKCRLSGLGKPYCECGSGYTGDSCDK
EISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCSAGQCCGPLRSKRRKYSFECTDG
SSFVDEVEKVVKCGCTNCPS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtggctgggggaagctcaccctgtccctggggctgctcctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcacgaagactgacttcgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtacgattgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgagctg
ctctttctggggactccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcaactggattacaac
cagatcagctgcattgaagatggggcgttcagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactatccgtggcaagtttcaaccatatgcccaaactc
agaacattccgcctccactccaacaacctgtactgcgactgccacctggcctggctgtcg
gactggctgcggcagcggccgcgcgtggggctctacacgcagtgcatgggcccgtcccac
ctccgcgggcacaacgtggccgaggtccagaagcgcgagtttgtctgcagcggtcaccag
tcctttatggctccatcctgcagtgtcttgcactgccctactgcatgcacctgtagtaac
aacatcgtggactgtcgtgggaaaggccttactgagatcccaacaaaccttccagaaacc
atcactgaaatacggttagaacaaaattcaatcaaggtgatacctcctggagctttctcc
ccctacaaaaagctccgaagaattgacctgagcaataaccagatctctgaagcagctcca
gatgctttccaggggttacgttcactcaattcactagtcctctatggcaataaaatcaca
gaacttccaaagggcctatttgaaggactcttttctctgcaactgctattattgaatgcc
aacaagatcaattgtctgcgagttgatgcatttcaagatctgcacaacttgaatcttctt
tctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctcccccctacgtgcc
attcagaccttgcatttggctcagaacccgtttatctgtgactgccatctgaagtggctg
gcggattaccttcacacaaaccccatcgagaccagcggtgcccgttgcaccagcccccgc
cgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgctcaggcact
gaagattacagatccaaattaagtggagactgctttgcagatttggcttgtcctgagaaa
tgtcgctgtgaaggaaccacagtggactgctccaatcagaaactcaacaaaattcctgat
cacattccccagtacacagcagagttgagactaaataacaatgaattttcagtcctggaa
gctactggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaag
attacagatatagaagaaggagcatttgatggagcctctggtgtgaatgaactattgctc
acaagcaatcgcttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaa
acactgatgctgaggagcaacagggtgagctgtgtgggaaatgacagcttcacagggctg
agctctgtccgcctgctctcgctgtatgacaaccagatcaccaccgtggcacccggctcc
ttcgacacgctgcattcgctctccacgctaaacctcttggccaatcccttcaactgcaac
tgccacctggcatggcttggagactggctacggaagaaacgcattgtgacagggaaccct
cgctgccagaaaccctacttcctcaaggagattcccatccaggatgtagcaattcaggat
tttacatgtgatgatggaaatgatgacaatagctgttctcccctggcccgctgccctgca
gaatgtacttgtctggacacagtagttcgctgcagcaacaaaggtctaaaagctttgcct
aaaggcatcccaaaagatgtgactgaactttatttggatggaaatcagtttaccctagtt
ccaaaagagctttccaactacaagcatttgacactcatagatttaagtaacaacagaatc
agcactctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagt
tacaaccgcctaagatgtattcctgcacggacttttgatggattgaaatcacttaggttg
ttgtctttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttca
gcattatcacacctggccattggtgcaaatcccctttattgtgattgtaacatgcagtgg
ctatctgactgggtaaaatcagagtacaaagaacctggtattgcacgttgtgctggtcct
ggagaaatggcagacaaacttcttctcacaactccttctaagaaattcacttgccaaggg
cccgtggatgttaatattcttgcaaagtgtaatccctgtttatcaagcccatgtaaaaat
gatggaacctgcaataatgatccagttgacttctacagatgtacatgcccctatggtttc
aagggtcaagactgtgatattcccattcatgcttgcattagtaacccgtgccaccatggt
ggaacttgtcatttgaaagaaggagaaaaggatggtttctggtgcacttgtgcagatgga
tttgaaggtgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgaaaac
aattctacttgtgtggatggaattaataactatacttgcctttgtccacctgaatataca
ggtgaactctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcac
gattcaaagtgcatcctgacacccaaaggatacaaatgtgattgcacacctggatatgta
ggtgagcattgtgatattgactttgacgactgccaggacaacaaatgtaaaaacggagca
cagtgcactgatgcagttaatggatacacatgcatttgcccagaagggtacagtggcttg
ttttgtgagttttcaccaccaatggttctacctcgcaccagcccttgtgataattatgaa
tgtcaaaatggggcccagtgtatcataaaagaaagtgaaccaatctgtcaatgtttatca
ggctaccagggtgagaaatgtgaaaagctgattagtataaacttcatcaacaaagaatcc
tatctgcaaatcccttcagctaagatacgcccccaaaccaatatcactctacagattgcc
acagatgaagacagtgggatcctgctgtacaaaggagataaagatcatatagcagtggaa
ctgtaccggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatt
tacagtgtggaaacaattaatgacggaaatttccatattgtggagctgctagctatggat
cagattctatctttatctattgatggaggaagccccaagataattaccaatttgtccaag
caatccactctgaactttgattctccactgtacataggaggcatgcctgtgaaaaacaac
atagcagctttgcgccagtcgccagggcagaacggcactagcttccatggctgcatccgt
aatctgtacatcaacagtgaactccaggacttcagaaatgtgcccctgcaagtgggaatt
ctgccaggttgtgagccttgccataagaaagtttgtgtgcacgggacatgccatgctacc
agccagtcaggcttctcctgtgagtgcgaaggaggatggaccggaccgctctgtgaccaa
caaaccaacgacccgtgtctcggaaataaatgtgtgcatggtacctgcttgccgatcaat
gcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagag
gaaatgctgcttaacccctgccaatccatcaggtgtaaacatggcaaatgtaggctttca
ggacttgggaaaccatattgcgaatgcggcagcggatacacgggggacagttgtgataaa
gaaatctcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtatgct
gcgtgccagacgaccaagaaggtatcgagactagaatgtaaaggcgggtgctcggccggg
cagtgctgcgggccgctgcgcagcaagaggcggaaatactccttcgagtgcaccgacggc
tcgtccttcgtggacgaggttgaaaaagtggtgaagtgtggctgtacaaattgtccctcc
taa
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