Serinus canaria (common canary): 103824472
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Entry
103824472 CDS
T05755
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
scan
Serinus canaria (common canary)
Pathway
scan03013
Nucleocytoplasmic transport
scan05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103824472 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103824472 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103824472 (NUP98)
03036 Chromosome and associated proteins [BR:
scan03036
]
103824472 (NUP98)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103824472 (NUP98)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103824472 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
103824472
NCBI-ProteinID:
XP_030090170
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSSNNTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
SINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKPHSSVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQEEWDKEIEPGLQQHPAGI
VLTRAGYYTIPTLEELARLTNDRKECIVTDFTIGRTGYGSIYFEGEINLTNLNLDEIVHI
RRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMDYEGRLEA
VSRRQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPLKVDTKKLKTTPVPPPGH
LPPQQMALNGKPAPPAQPLELEQLGRLVELDSDMADVTQEPAQEPLAEDALAEEQEAVPA
STHIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKMDTSQEICSPRLPISKSQ
GQKRHSAAGLLQSKFASVLSQAPSAAVADAKGPRTLDSAPSAALWSAASPLASAFAVPAA
VPEVQVKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQL
SGSSEVEDAQLEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEI
KLKHSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTVAETVVKHWCLAWTLCEAIW
GKLKELEASLEEPSEYVLALERRRAFSRWLSETAAGRIEEEVALSRHGSHIEAVFSCLTG
KRIGEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFA
LLAGKPVWQLSERISVNVCSLLDWKRCVAVHLWYLLPPTASISRALAMYESAFQNTSECE
KYACCPLPPYLEDSGYVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPL
DFRLSWHLWEVLRAMNYCHLSQQSWGVLNTSYAAQLESEGLWEWAVFVMLHEPDTHVREK
AVRELLGRHCALAESPECWAKESFLTQRLCVPPRWIHEAKAVRARMEGDKHKEALFLFKA
GHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVN
EMLDRIQQLDVTTYELERLHTKVTSLCNRIEQLQCHTAKDRLAQSDMAKRVANVLRAVLS
LQQGPEAGPEPAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcttttggaactccgttcggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttggtacgaccagcggaggagccttcgggacctcggcc
ttcggctccagcaacaacaccggcagcctgttcgggagcacgcagaccaagccaggaggg
ttgtttgggtccaccacgttcaaccaaccagccacctcctccaccagcactggctttggc
tttggaacatccactgggacatcaaacagcctctttggaaccaccagcactggtggaagc
ctgttctcatcccagaataatgcctttgcacagaacaaaccagctggttttggaaacttt
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagcttcactgctgctccaactggcacg
actattaaatttaatcccccgaccggcaccgacaccatggtgaaatccggcgtcagcacc
agcatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctt
gaggagctccgtttggaagactaccaggcaaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggttcttccactgccacgtccagcacagccacaggg
ctttttggctcttccactaccaatacaggcttctcctatgggcagaataaaactgctttt
ggaaccagtacgaccggctttggcacgggcaccaccggggggctctttgggcagcagtcc
cagaccacgagtctgttcaacaaacccttcggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctcgcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacaggaactggcctttttggacaagccaacacgggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggactctttggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcaactggcactctgggcactggacttggaacaggg
tttggaacagctctgggggcaggacagacgtccttgtttgggaacacgcagccaaagctg
gggggaacgctgggaacaggagcgttcggagccccaggattcaacacatccacagccacc
ctgggcttcggggcccctcagcctgctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctgacctactccccctttggggactcc
ccactcttcagaaaccccatgtcagacccgaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggctctgacgacccccacccactacaagctgaccccccgcccc
gccaccagagtgcggcccaaggccctgcagtcagcgggctcagccaagtcccagctcttt
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcaacagcagcaacctgttctcccctgtgagccga
gagaacgaggacctggcctcgccgtcggagtacccggagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccacaggcaggacggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaaccccattgccaagcccatcccgcagagcctggag
ggcagcgggcacaagccccactcgagcgtggacgacaccatcgtggcgctgaacatgcgc
gcggcgctgcgcaacggcctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggaggagtgggacaaggagatcgagcctgggctccagcagcatcctgcagggatt
gtcctgacacgagctggctactacaccatcccgaccctggaggagctggcccggctgacc
aacgacaggaaggaatgtatcgtgacagacttcaccatcggccgcacgggttatggatca
atttacttcgaaggggaaataaatctaacaaacttaaacctggatgagattgtacatatc
cggagaaaagaagttattgtttaccctgatgacgaaaaaaaacctcccattggggaaggg
ttaaataggcgagccgaggtgaccctggacggggtgtggcccacggacaagacgtcgcgg
tgcctgatcaagagccccgagcggctggccgagatggactacgagggccggctggaggcc
gtgtcccgcaggcagggcgcgcgcttcaaggagtaccgccccgagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagattctgatgaggaggaggaagat
catcctttaaaagtggacaccaagaagttaaagaccacacctgtgccacccccagggcac
ctgccaccccagcagatggccctgaacggcaaaccagcacccccggctcagcccctggag
ctggagcagctgggcaggctggtggagctggacagtgacatggcagacgtcacccaggag
ccagcccaggagcccttggcagaggatgccctggccgaggagcaggaggcagtgccagcg
tccacgcacatcgcatccacccagggcatcaacccctacgtgctgcagatcatgaaagct
tccttacttgctgatgatgacgacctggatttgatcctggattatcctgggaagcaacct
gtcaagatggacacttcccaagagatctgctccccaaggcttcccatttcaaaatcacaa
ggacagaaaagacactcagctgctgggctgctgcaatccaagtttgccagtgtcctttcc
caagcaccgagtgctgccgtggcagatgccaagggccccaggactttggacagtgccccc
tctgctgcgctgtggtcggcggcgtcgccgctggcctcggcctttgccgtgcccgcggcc
gtgcccgaggtgcaggtgaagacagtgggggcccgcaggcagcgcgggctcgtccctctg
gagaggtccatcacctacgggaaagggaagctcctgatggacatgggactcttcatgggc
cgctccttccgtgtgggctggggccccaactggacgctggtcaattgtggagatcagctg
agtggctccagtgaagtggaagacgctcagttggagcccgtggaatacggattcctgccc
actcccgtggctcccaaatcactcacagaatcccctttcaaagttcacgtggaaaagttg
agcttggaacaatggaagatggacagagacaaggagctgtatctcacccctctggagata
aagctgaagcacagcactgtccatatggatgagccctgtcctctcctggcccccaaccct
ggagtctctgctatccatgactatgctgactgggccaggaaagcatccgaggatcccact
gtggcagagaccgttgtgaagcactggtgcttggcctggacgttatgtgaggccatctgg
ggcaagctgaaggagctggaggccagcctggaggagcccagcgagtacgtgctggcgctg
gagcggcgccgggcgttctcgcggtggctctccgagacggcggccgggcgcatcgaggag
gaggtggctctgtcccggcatggcagccacattgaggccgtgttcagctgcctcacgggc
aagaggatcggcgaggcctgcaggctggcacagcaggcaggtgaccaccgcctggcgctg
ctgctgtcacagctggctggcagccagcccgtgagggacctgctgaccctgcagctggtg
gactggcaccgcctgcacagcgaccgcttcatccaggaggagcggctgcgcctcttcgcc
ctgctcgcgggcaagccggtgtggcagctctctgagaggatcagtgtcaacgtgtgctcg
ctgctggactggaagcgctgcgtggccgtgcacctctggtacctgctgccccccacggcc
tccatctccagggctctggccatgtacgagtcagcctttcagaacacctcagagtgtgaa
aagtatgcctgctgtcctctgcctccttacctggaggattctgggtatgtcattgaggaa
gatgacaatggaggaaggcccctgagagatgtctgcttccatttgttaaagctctacagt
gacaggtcctatgagcttgaccagctgctggatcccaggagtgtcacctctgacccgctg
gatttccgcctcagctggcacctgtgggaggtgctcagggccatgaactactgccacctg
tcccagcagagctggggggtgctcaacaccagttatgctgcccagctggagagcgagggg
ctgtgggaatgggccgtgttcgtgatgctgcacgagcctgacacacatgtccgtgagaag
gcggtgcgggagctgctgggccggcactgcgccctggccgagagccccgagtgctgggcc
aaggagagcttcctgacacagcgcctctgcgtgcccccgcgctggatccacgaggccaag
gctgtccgggccaggatggagggggacaagcacaaagaggcccttttcctcttcaaggct
ggccactggaaccagtgccacaagctggttgtcaggcacttggcctcagatgcaattatc
aacgagaactacaagtacctgaagggattcctggaggatctggcgcccccggagcgcagc
gcgctcatccaggactgggagctggcagggctggtctacctcgactacatccgtgtcaac
gagatgctggacaggattcagcagctggatgttaccacctacgagctggagcggttacac
accaaagtgacatccctgtgcaacaggatagagcagctgcagtgccacacggccaaggac
cgcctggctcagtcagacatggcgaagcgcgtggccaacgtgctgcgggcggtgctgagc
ctgcagcagggccccgaggcgggccccgagcccgcggagccgcgcgttcccctgcgcctg
ctggccccgcacatcggccgcctgcccatgcccgaggactacgcgctggaggagctgcgc
ggcctcacccaggcttacctgcgcgagctggccctggccgcgcactga
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integrated database retrieval system
