Serinus canaria (common canary): 103824594
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Entry
103824594 CDS
T05755
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
scan
Serinus canaria (common canary)
Pathway
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103824594 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
103824594 (TRIM54)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103824594 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
TRIM_CC
zf-RING_6
RHH_9
Sina_RING
CYP38_PsbQ-like
Zn_ribbon_FGT1_2
DUF5799
CoiA_N
Motif
Other DBs
NCBI-GeneID:
103824594
NCBI-ProteinID:
XP_030092171
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVGGPPGSRG
AEGSPTATLTPTLTXQSELSDGIAMLVAGNDRIQAIITQMEEICHTIEENGRRQKQHLGL
RFDALYGILEERKKELLQSIAAEQEAKLQRVRGLIRQYGDHLEASSKLVESAIQAMEEPQ
MALYLQHSKELLKKITDMSKASMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLGE
DEGDGPGDGSEAAADEDRLDSLEVPEAAEDVGPRQKPASSPHGQH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtagggctgaagccgcttctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgttttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcgggcggttccggtgcccgtcc
tgccggcacgaggtggtgctggaccggcacggggtgtacggattgcagcggaacctgctc
gtggaaaacatcatcgacatctacaagcaagagtcggcccgaccccttcatgccaaggct
gagcagcacctcatgtgcgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctgtgcaaggtgttcggagcacacaaggactgcgaggtg
gccccgctgccggccgtctaccagcgacagaaggtgggggggccgccgggctctcggggg
gccgagggttcccccacagccaccctcacacccaccctcactncccagagcgagctcagc
gacggcattgccatgctggtggcggggaacgaccggatccaggccatcatcacgcagatg
gaggagatctgccacaccatcgaggagaacggcaggcggcagaagcagcacctggggctg
cgcttcgacgcgctctacggcatcctggaggagcgcaagaaggagctgctgcagagcatc
gccgccgagcaggaggccaagctgcagcgcgtccgcgggctcatccgccagtacggagac
cacctggaggcctcctccaagctggtggagtcagccatccaggccatggaggagccccag
atggccctgtacctgcagcactccaaggaactcctgaaaaagatcacagacatgtccaag
gcatccatgagcagccgccctgagcccggctacgagaacatggaccacttctccatcaac
gtggactacgtggctgagatgctgaggaccatcgagttccagacagagcccctgggcgag
gatgagggggatggacctggggacggcagtgaggctgcagcagacgaggaccggctggac
agcctggaggtgcccgaggctgctgaagatgtggggccgaggcagaagccagcgagctct
ccccatggtcagcactga
DBGET
integrated database retrieval system
